Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Cux1P53564 Gm27163-201ENSMUST00000184767 409 ntBASIC3.49□□□□□ -1.85
Cux1P53564 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.49□□□□□ -1.85
Cux1P53564 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Cux1P53564 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Cux1P53564 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.49□□□□□ -1.85
Cux1P53564 Gm3940-201ENSMUST00000105087 432 ntBASIC3.49□□□□□ -1.85
Cux1P53564 Mir8116-201ENSMUST00000184134 97 ntBASIC3.49□□□□□ -1.85
Cux1P53564 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.49□□□□□ -1.85
Cux1P53564 Gm28724-202ENSMUST00000194218 295 ntBASIC3.49□□□□□ -1.85
Cux1P53564 Gm2142-201ENSMUST00000197899 589 ntBASIC3.49□□□□□ -1.85
Cux1P53564 Gm43626-201ENSMUST00000198575 162 ntBASIC3.49□□□□□ -1.85
Cux1P53564 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC3.49□□□□□ -1.85
Cux1P53564 Gm8274-201ENSMUST00000219820 463 ntBASIC3.49□□□□□ -1.85
Cux1P53564 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Cux1P53564 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Cux1P53564 Gm25636-201ENSMUST00000082666 133 ntBASIC3.49□□□□□ -1.85
Cux1P53564 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Cux1P53564 Gm15933-201ENSMUST00000117215 616 ntBASIC3.48□□□□□ -1.85
Cux1P53564 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Cux1P53564 Trav20-201ENSMUST00000142754 347 ntBASIC3.48□□□□□ -1.85
Cux1P53564 Gm22947-201ENSMUST00000158559 91 ntBASIC3.48□□□□□ -1.85
Cux1P53564 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC3.48□□□□□ -1.85
Cux1P53564 Gm43427-201ENSMUST00000198188 331 ntBASIC3.48□□□□□ -1.85
Cux1P53564 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC3.48□□□□□ -1.85
Cux1P53564 Gm45078-201ENSMUST00000205343 546 ntBASIC3.48□□□□□ -1.85
Cux1P53564 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.48□□□□□ -1.85
Cux1P53564 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.48□□□□□ -1.85
Cux1P53564 AC168062.3-201ENSMUST00000227025 165 ntBASIC3.48□□□□□ -1.85
Cux1P53564 Snord21-201ENSMUST00000082519 94 ntBASIC3.48□□□□□ -1.85
Cux1P53564 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Cux1P53564 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.47□□□□□ -1.85
Cux1P53564 Gm23942-201ENSMUST00000101956 107 ntBASIC3.47□□□□□ -1.85
Cux1P53564 Gm14794-201ENSMUST00000118181 192 ntBASIC3.47□□□□□ -1.85
Cux1P53564 n-R5s164-201ENSMUST00000122664 112 ntBASIC3.47□□□□□ -1.85
Cux1P53564 Gm23670-201ENSMUST00000157469 119 ntBASIC3.47□□□□□ -1.85
Cux1P53564 Gm25910-201ENSMUST00000157620 140 ntBASIC3.47□□□□□ -1.85
Cux1P53564 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Cux1P53564 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.47□□□□□ -1.85
Cux1P53564 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cux1P53564 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cux1P53564 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cux1P53564 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cux1P53564 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cux1P53564 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cux1P53564 Gm19761-201ENSMUST00000205372 391 ntBASIC3.47□□□□□ -1.85
Cux1P53564 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.47□□□□□ -1.85
Cux1P53564 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.47□□□□□ -1.85
Cux1P53564 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.47□□□□□ -1.85
Cux1P53564 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cux1P53564 Gm23867-201ENSMUST00000122649 274 ntBASIC3.46□□□□□ -1.86
Cux1P53564 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.46□□□□□ -1.86
Cux1P53564 Mir7017-201ENSMUST00000184894 62 ntBASIC3.46□□□□□ -1.86
Cux1P53564 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.46□□□□□ -1.86
Cux1P53564 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.46□□□□□ -1.86
Cux1P53564 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.46□□□□□ -1.86
Cux1P53564 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Cux1P53564 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cux1P53564 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
Cux1P53564 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cux1P53564 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cux1P53564 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Cux1P53564 Gm26077-201ENSMUST00000104064 123 ntBASIC3.45□□□□□ -1.86
Cux1P53564 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.45□□□□□ -1.86
Cux1P53564 Gm27608-201ENSMUST00000184822 162 ntBASIC3.45□□□□□ -1.86
Cux1P53564 Gm29475-201ENSMUST00000190767 312 ntBASIC3.45□□□□□ -1.86
Cux1P53564 Gm37579-201ENSMUST00000194291 142 ntBASIC3.45□□□□□ -1.86
Cux1P53564 Gm45382-201ENSMUST00000210607 151 ntBASIC3.45□□□□□ -1.86
Cux1P53564 AC162376.1-201ENSMUST00000220120 435 ntBASIC3.45□□□□□ -1.86
Cux1P53564 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.45□□□□□ -1.86
Cux1P53564 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Cux1P53564 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Cux1P53564 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.44□□□□□ -1.86
Cux1P53564 Mir542-201ENSMUST00000102186 85 ntBASIC3.44□□□□□ -1.86
Cux1P53564 Gm13228-201ENSMUST00000118937 634 ntBASIC3.44□□□□□ -1.86
Cux1P53564 Gm12607-201ENSMUST00000120724 493 ntBASIC3.44□□□□□ -1.86
Cux1P53564 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.44□□□□□ -1.86
Cux1P53564 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.44□□□□□ -1.86
Cux1P53564 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.44□□□□□ -1.86
Cux1P53564 Gm19418-201ENSMUST00000197436 580 ntBASIC3.44□□□□□ -1.86
Cux1P53564 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.44□□□□□ -1.86
Cux1P53564 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cux1P53564 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Cux1P53564 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC3.44□□□□□ -1.86
Cux1P53564 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cux1P53564 Gm21991-201ENSMUST00000180006 508 ntBASIC3.44□□□□□ -1.86
Cux1P53564 Mir6901-201ENSMUST00000185062 62 ntBASIC3.44□□□□□ -1.86
Cux1P53564 Gm6501-201ENSMUST00000187178 916 ntBASIC3.44□□□□□ -1.86
Cux1P53564 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC3.44□□□□□ -1.86
Cux1P53564 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.44□□□□□ -1.86
Cux1P53564 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.44□□□□□ -1.86
Cux1P53564 Gm23623-201ENSMUST00000082461 107 ntBASIC3.44□□□□□ -1.86
Cux1P53564 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cux1P53564 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cux1P53564 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cux1P53564 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Cux1P53564 Gm15275-201ENSMUST00000154752 347 ntBASIC3.43□□□□□ -1.86
Cux1P53564 Gm22084-201ENSMUST00000157585 105 ntBASIC3.43□□□□□ -1.86
Cux1P53564 Gm22923-201ENSMUST00000174952 110 ntBASIC3.43□□□□□ -1.86
Cux1P53564 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 111.9 ms