Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AF357428-201ENSMUST00000083815 69 ntBASIC3.98□□□□□ -1.77
Traf1P39428 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Traf1P39428 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Traf1P39428 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Traf1P39428 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.98□□□□□ -1.77
Traf1P39428 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Traf1P39428 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Traf1P39428 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.97□□□□□ -1.77
Traf1P39428 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Traf1P39428 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Traf1P39428 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Traf1P39428 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Traf1P39428 Gm14681-201ENSMUST00000118047 411 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Gm6274-201ENSMUST00000118173 797 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Gm15231-201ENSMUST00000119174 447 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Gm23791-201ENSMUST00000122553 293 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Traf1P39428 Mir5127-201ENSMUST00000175295 71 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Gm26701-201ENSMUST00000181571 234 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Gm26933-201ENSMUST00000182320 827 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.97□□□□□ -1.77
Traf1P39428 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.97□□□□□ -1.77
Traf1P39428 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Traf1P39428 Gm17893-201ENSMUST00000203017 770 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.97□□□□□ -1.77
Traf1P39428 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.97□□□□□ -1.77
Traf1P39428 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Gm9628-201ENSMUST00000222169 725 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Gm18026-201ENSMUST00000222789 727 ntBASIC3.97□□□□□ -1.77
Traf1P39428 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.97□□□□□ -1.77
Traf1P39428 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Traf1P39428 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Traf1P39428 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Traf1P39428 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Traf1P39428 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Traf1P39428 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.96□□□□□ -1.77
Traf1P39428 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Traf1P39428 Mir291a-201ENSMUST00000104815 82 ntBASIC3.96□□□□□ -1.78
Traf1P39428 Gm25295-201ENSMUST00000122794 306 ntBASIC3.96□□□□□ -1.78
Traf1P39428 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Traf1P39428 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.96□□□□□ -1.78
Traf1P39428 Gm6140-201ENSMUST00000192494 966 ntBASIC3.96□□□□□ -1.78
Traf1P39428 Gm37428-201ENSMUST00000193886 137 ntBASIC3.96□□□□□ -1.78
Traf1P39428 Gm7142-201ENSMUST00000194232 586 ntBASIC3.96□□□□□ -1.78
Traf1P39428 Gm42828-201ENSMUST00000199669 469 ntBASIC3.96□□□□□ -1.78
Traf1P39428 Gm5317-201ENSMUST00000204445 847 ntBASIC3.96□□□□□ -1.78
Traf1P39428 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.96□□□□□ -1.78
Traf1P39428 Gm18597-201ENSMUST00000209519 694 ntBASIC3.96□□□□□ -1.78
Traf1P39428 Gm35405-201ENSMUST00000218754 400 ntBASIC3.96□□□□□ -1.78
Traf1P39428 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.96□□□□□ -1.78
Traf1P39428 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.96□□□□□ -1.78
Traf1P39428 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Traf1P39428 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Traf1P39428 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Traf1P39428 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Traf1P39428 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.96□□□□□ -1.78
Traf1P39428 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Traf1P39428 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Traf1P39428 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Traf1P39428 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.95□□□□□ -1.78
Traf1P39428 Gm12125-201ENSMUST00000117261 736 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Gm16445-201ENSMUST00000120399 714 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC3.95□□□□□ -1.78
Traf1P39428 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Traf1P39428 Gm26100-201ENSMUST00000157245 127 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Gm25438-201ENSMUST00000158281 110 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Traf1P39428 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Gm28637-201ENSMUST00000179424 345 ntBASIC3.95□□□□□ -1.78
Traf1P39428 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.95□□□□□ -1.78
Traf1P39428 Gm21489-201ENSMUST00000189668 818 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Gm29288-201ENSMUST00000191582 901 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Gm45226-201ENSMUST00000206602 288 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.95□□□□□ -1.78
Traf1P39428 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.95□□□□□ -1.78
Traf1P39428 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.95□□□□□ -1.78
Traf1P39428 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Traf1P39428 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Traf1P39428 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Traf1P39428 Gm7171-201ENSMUST00000177413 1349 ntBASIC3.95□□□□□ -1.78
Traf1P39428 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.94□□□□□ -1.78
Traf1P39428 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Traf1P39428 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Traf1P39428 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Traf1P39428 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Traf1P39428 Gm12656-201ENSMUST00000118149 577 ntBASIC3.94□□□□□ -1.78
Traf1P39428 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.94□□□□□ -1.78
Traf1P39428 Gm28390-201ENSMUST00000185212 700 ntBASIC3.94□□□□□ -1.78
Traf1P39428 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.94□□□□□ -1.78
Traf1P39428 Gm28146-201ENSMUST00000185517 701 ntBASIC3.94□□□□□ -1.78
Traf1P39428 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Traf1P39428 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Traf1P39428 Gm32447-201ENSMUST00000194265 697 ntBASIC3.94□□□□□ -1.78
Traf1P39428 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.94□□□□□ -1.78
Traf1P39428 Gm43217-201ENSMUST00000199513 367 ntBASIC3.94□□□□□ -1.78
Traf1P39428 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms