Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd3P09027 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Hoxd3P09027 CT025686.2-201ENSMUST00000227898 3315 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd3P09027 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd3P09027 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 AC115289.2-201ENSMUST00000223836 2803 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm23178-201ENSMUST00000116782 95 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm13504-201ENSMUST00000117490 316 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm13451-201ENSMUST00000117649 592 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm13533-201ENSMUST00000121104 177 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm11804-201ENSMUST00000121663 468 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm25621-201ENSMUST00000157223 114 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm23584-201ENSMUST00000157655 129 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm17511-201ENSMUST00000172206 342 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm20651-201ENSMUST00000177219 329 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm28467-201ENSMUST00000190981 318 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm37601-201ENSMUST00000194922 394 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm42694-201ENSMUST00000196951 358 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm43193-201ENSMUST00000197732 441 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm38670-201ENSMUST00000199248 77 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm45777-201ENSMUST00000213009 301 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm25814-201ENSMUST00000082754 107 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm23932-201ENSMUST00000082914 107 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm23454-201ENSMUST00000083332 133 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm23650-201ENSMUST00000083355 70 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Mir302d-201ENSMUST00000083513 66 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd3P09027 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd3P09027 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd3P09027 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxd3P09027 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm11718-201ENSMUST00000119942 537 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.34□□□□□ -1.71
Hoxd3P09027 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm23855-201ENSMUST00000158377 135 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm23774-201ENSMUST00000158990 131 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm25121-201ENSMUST00000179846 79 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm27855-201ENSMUST00000184122 128 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm37162-201ENSMUST00000191708 551 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm44010-201ENSMUST00000204432 331 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm45249-201ENSMUST00000211021 348 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm30674-201ENSMUST00000214523 392 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 CT025689.3-201ENSMUST00000223817 301 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm10064-201ENSMUST00000071235 399 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm24616-201ENSMUST00000083274 139 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Mir133b-201ENSMUST00000083546 119 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
Hoxd3P09027 Gm45632-201ENSMUST00000211532 1888 ntBASIC4.34□□□□□ -1.71
Hoxd3P09027 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC4.34□□□□□ -1.72
Hoxd3P09027 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxd3P09027 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxd3P09027 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxd3P09027 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxd3P09027 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxd3P09027 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxd3P09027 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxd3P09027 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Hoxd3P09027 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxd3P09027 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 CT025604.1-201ENSMUST00000221111 3436 ntBASIC4.33□□□□□ -1.72
Hoxd3P09027 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd3P09027 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd3P09027 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd3P09027 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd3P09027 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms