Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm23223-201ENSMUST00000158119 127 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm25898-201ENSMUST00000158303 106 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Hmgb3O54879 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm25476-201ENSMUST00000175125 185 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm28314-201ENSMUST00000191276 345 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm17967-201ENSMUST00000195319 647 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm44903-201ENSMUST00000206840 130 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Hmgb3O54879 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Hmgb3O54879 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Gm6030-201ENSMUST00000078768 402 ntBASIC2.19□□□□□ -2.06
Hmgb3O54879 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Hmgb3O54879 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm24118-201ENSMUST00000103972 126 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm12697-201ENSMUST00000118008 667 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm14172-201ENSMUST00000118255 644 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm15988-201ENSMUST00000118677 367 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm9440-201ENSMUST00000119667 539 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm23867-201ENSMUST00000122649 274 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Hmgb3O54879 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Hmgb3O54879 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm25185-201ENSMUST00000157754 96 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Mir6963-201ENSMUST00000183535 71 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm8676-201ENSMUST00000184206 637 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm29104-201ENSMUST00000186304 222 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Olfr936-202ENSMUST00000216912 937 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm7034-201ENSMUST00000218638 645 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Hmgb3O54879 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 AC102603.1-201ENSMUST00000227481 584 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Hmgb3O54879 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm24147-201ENSMUST00000082763 144 ntBASIC2.18□□□□□ -2.06
Hmgb3O54879 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Hmgb3O54879 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm25764-201ENSMUST00000104092 134 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm23609-201ENSMUST00000104542 127 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm6429-201ENSMUST00000117144 475 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm13504-201ENSMUST00000117490 316 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm14162-201ENSMUST00000121985 601 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm15038-201ENSMUST00000122144 296 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm23887-201ENSMUST00000122683 172 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmgb3O54879 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Hmgb3O54879 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2.17□□□□□ -2.06
Hmgb3O54879 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Hmgb3O54879 Mir8118-201ENSMUST00000183962 129 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm28623-201ENSMUST00000187219 192 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm42516-201ENSMUST00000198691 767 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm44274-201ENSMUST00000203417 256 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm44060-201ENSMUST00000204440 410 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm45420-201ENSMUST00000211243 425 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm18645-202ENSMUST00000212222 760 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 AC151730.2-201ENSMUST00000224027 475 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Hmgb3O54879 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Hmgb3O54879 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmgb3O54879 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmgb3O54879 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.17□□□□□ -2.06
Hmgb3O54879 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.17□□□□□ -2.06
Hmgb3O54879 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Hmgb3O54879 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms