Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm36934-201ENSMUST00000192007 306 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm35876-201ENSMUST00000205044 459 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm45192-201ENSMUST00000206749 283 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm18703-201ENSMUST00000215318 333 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Mir294-201ENSMUST00000104710 84 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm15231-201ENSMUST00000119174 447 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm13155-201ENSMUST00000119277 646 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm6373-201ENSMUST00000121026 360 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm13511-201ENSMUST00000121167 363 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm8178-201ENSMUST00000121570 646 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm12045-201ENSMUST00000122122 573 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm17119-201ENSMUST00000163943 280 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm20399-201ENSMUST00000174652 132 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Mir3066-201ENSMUST00000175296 83 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm26746-201ENSMUST00000181722 487 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm29408-201ENSMUST00000187536 216 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm28474-201ENSMUST00000188501 315 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm5268-201ENSMUST00000189212 940 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm45173-201ENSMUST00000206819 305 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm35857-201ENSMUST00000212739 178 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.24□□□□□ -1.89
Trav13d-3J3QMG8 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm25088-201ENSMUST00000101803 79 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Mir92b-201ENSMUST00000102300 83 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm13720-201ENSMUST00000120741 196 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm25706-201ENSMUST00000157828 247 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Mir7j-201ENSMUST00000184427 122 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms