Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm42639-201ENSMUST00000197061 1871 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.28□□□□□ -1.73
Pcdh1F7BJK1 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm11673-201ENSMUST00000117846 331 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm2066-201ENSMUST00000118046 389 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm12156-201ENSMUST00000119188 554 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm26278-201ENSMUST00000157098 132 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm24577-201ENSMUST00000158580 63 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm24636-201ENSMUST00000158673 288 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm3191-201ENSMUST00000167139 346 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm24819-201ENSMUST00000175094 166 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm4842-201ENSMUST00000183237 835 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm9722-201ENSMUST00000194568 802 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm19726-201ENSMUST00000205008 240 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm45395-201ENSMUST00000209891 559 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm45704-201ENSMUST00000212582 403 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 AC163033.1-201ENSMUST00000218608 157 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm9309-201ENSMUST00000223537 546 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm5215-201ENSMUST00000054380 405 ntBASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh1F7BJK1 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Mir297a-2-201ENSMUST00000103795 90 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm24683-201ENSMUST00000104840 88 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm13250-201ENSMUST00000117209 753 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm11448-201ENSMUST00000120427 450 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm22514-201ENSMUST00000122547 308 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm26347-201ENSMUST00000157526 131 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm22769-201ENSMUST00000158367 98 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm23312-201ENSMUST00000158774 102 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm5258-201ENSMUST00000165437 327 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Mir3110-201ENSMUST00000175053 80 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm5139-201ENSMUST00000175943 249 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm19637-201ENSMUST00000185933 579 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm28860-201ENSMUST00000188103 313 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm44795-201ENSMUST00000205496 319 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm7726-201ENSMUST00000206241 231 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm18306-201ENSMUST00000207338 569 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm39197-201ENSMUST00000212069 457 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm46327-201ENSMUST00000218240 365 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 AC154576.2-202ENSMUST00000223916 688 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 CT010454.1-201ENSMUST00000225975 265 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 AC133156.1-202ENSMUST00000227284 363 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm24045-201ENSMUST00000083113 98 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Rny1-201ENSMUST00000083767 112 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm10222-201ENSMUST00000088336 294 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm20345-201ENSMUST00000175839 2414 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.26□□□□□ -1.73
Pcdh1F7BJK1 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms