Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm13321-201ENSMUST00000117101 400 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm12112-201ENSMUST00000117772 231 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm3267-201ENSMUST00000118671 473 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm25293-201ENSMUST00000122792 285 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm26350-201ENSMUST00000157531 288 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm22389-201ENSMUST00000158193 301 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Mir1947-201ENSMUST00000158235 85 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm22411-201ENSMUST00000175462 126 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm22002-201ENSMUST00000175622 125 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm28288-201ENSMUST00000191019 214 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm34176-201ENSMUST00000192621 474 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm37882-201ENSMUST00000195254 196 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm42925-201ENSMUST00000197359 285 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Gm22350-201ENSMUST00000083924 156 ntBASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc9bA3KGF9 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm14940-201ENSMUST00000119309 495 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm15212-201ENSMUST00000122403 466 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm23557-201ENSMUST00000157820 138 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm24402-201ENSMUST00000157873 91 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm23759-201ENSMUST00000158351 268 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Mir6412-201ENSMUST00000184477 97 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm37801-201ENSMUST00000194754 274 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm42570-201ENSMUST00000195937 292 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm43284-201ENSMUST00000200103 253 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm43169-201ENSMUST00000199544 4734 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc9bA3KGF9 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm14296-202ENSMUST00000108931 750 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm13491-201ENSMUST00000118267 235 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm12413-201ENSMUST00000121508 312 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Mir3104-201ENSMUST00000174911 63 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm27754-201ENSMUST00000183340 126 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm27551-201ENSMUST00000184258 77 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Mir195b-201ENSMUST00000184814 97 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm27781-201ENSMUST00000185185 92 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm45434-201ENSMUST00000210550 293 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm45815-201ENSMUST00000220241 146 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm23932-201ENSMUST00000082914 107 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm23650-201ENSMUST00000083355 70 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.71□□□□□ -1.66
Ccdc9bA3KGF9 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms