Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm24120-201ENSMUST00000103978 129 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm26396-201ENSMUST00000104093 132 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm26019-201ENSMUST00000104407 119 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm11372-201ENSMUST00000117348 570 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm16089-201ENSMUST00000117679 336 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm16128-201ENSMUST00000117855 626 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm13478-201ENSMUST00000118312 413 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm15333-201ENSMUST00000118825 364 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm26255-201ENSMUST00000122492 103 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm24192-201ENSMUST00000157978 145 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm26171-201ENSMUST00000158422 131 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm17109-201ENSMUST00000163985 358 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm3851-201ENSMUST00000168653 318 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Mir3066-201ENSMUST00000175296 83 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm20674-201ENSMUST00000177452 369 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm25314-201ENSMUST00000178810 79 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Mir6393-201ENSMUST00000183709 94 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm28141-201ENSMUST00000186676 342 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm17781-201ENSMUST00000195232 649 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm43804-201ENSMUST00000198280 456 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm18100-201ENSMUST00000200897 452 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm18120-201ENSMUST00000220079 511 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm22826-201ENSMUST00000083774 165 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm22868-201ENSMUST00000083955 164 ntBASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
H2afb3S4R1G7 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm26387-201ENSMUST00000104238 132 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm23226-201ENSMUST00000116927 103 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm13664-201ENSMUST00000117304 345 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm11432-201ENSMUST00000117334 231 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm14566-201ENSMUST00000118915 321 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm11798-201ENSMUST00000119150 421 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm5060-201ENSMUST00000120072 599 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm14915-201ENSMUST00000120747 204 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm13430-201ENSMUST00000121366 288 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm13007-201ENSMUST00000121866 365 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm25058-201ENSMUST00000157365 128 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm24737-201ENSMUST00000158861 100 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm24418-201ENSMUST00000177597 79 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm24639-201ENSMUST00000178518 79 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm23076-201ENSMUST00000179082 79 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm25077-201ENSMUST00000179157 79 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm21171-201ENSMUST00000180048 673 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm27233-201ENSMUST00000184030 307 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm27805-201ENSMUST00000184513 79 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm43631-201ENSMUST00000202011 369 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 AC124549.1-201ENSMUST00000225912 333 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm7984-201ENSMUST00000060640 538 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm22229-201ENSMUST00000082987 108 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm23464-201ENSMUST00000083145 147 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm23677-201ENSMUST00000083156 104 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
H2afb3S4R1G7 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms