Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Mir6925-201ENSMUST00000197857 70 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm43440-201ENSMUST00000201957 729 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm45072-201ENSMUST00000208673 929 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm18871-201ENSMUST00000218655 745 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm18491-201ENSMUST00000192492 1594 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm15399-201ENSMUST00000118055 724 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm14905-201ENSMUST00000122351 639 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm37377-201ENSMUST00000191733 304 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm8747-201ENSMUST00000195392 751 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm37290-201ENSMUST00000195775 339 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm45013-201ENSMUST00000206883 178 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.5□□□□□ -2.01
Scn8aQ9WTU3 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Mir592-201ENSMUST00000102113 96 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm12492-201ENSMUST00000117665 564 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm11943-201ENSMUST00000119473 327 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm12956-201ENSMUST00000122184 414 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm22534-201ENSMUST00000158173 104 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm6501-201ENSMUST00000187178 916 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm42828-201ENSMUST00000199669 469 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm7726-201ENSMUST00000206241 231 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm6030-201ENSMUST00000078768 402 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Snord14c-201ENSMUST00000101927 86 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm14125-201ENSMUST00000113442 680 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm11253-201ENSMUST00000118486 201 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm26411-201ENSMUST00000157668 107 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm22730-201ENSMUST00000158085 171 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm22666-201ENSMUST00000158717 164 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm5374-201ENSMUST00000222868 657 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm25628-201ENSMUST00000084002 105 ntBASIC2.49□□□□□ -2.01
Scn8aQ9WTU3 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.48□□□□□ -2.01
Scn8aQ9WTU3 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Scn8aQ9WTU3 Snord65-201ENSMUST00000104269 72 ntBASIC2.48□□□□□ -2.01
Scn8aQ9WTU3 Gm12598-201ENSMUST00000117333 830 ntBASIC2.48□□□□□ -2.01
Scn8aQ9WTU3 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Scn8aQ9WTU3 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC2.48□□□□□ -2.01
Scn8aQ9WTU3 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.48□□□□□ -2.01
Scn8aQ9WTU3 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.48□□□□□ -2.01
Scn8aQ9WTU3 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.48□□□□□ -2.01
Scn8aQ9WTU3 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm22782-201ENSMUST00000104082 132 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm25485-201ENSMUST00000104120 132 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm28637-201ENSMUST00000179424 345 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm44403-201ENSMUST00000198554 129 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 AC167013.2-202ENSMUST00000227035 333 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Olfr203-201ENSMUST00000089305 924 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm13340-201ENSMUST00000117219 1545 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm10074-201ENSMUST00000174543 249 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm27608-201ENSMUST00000184822 162 ntBASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC2.47□□□□□ -2.01
Scn8aQ9WTU3 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms