Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Nubp1Q9R060 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm37879-201ENSMUST00000193112 1995 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm13818-201ENSMUST00000119441 511 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm14267-201ENSMUST00000119751 496 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm12808-201ENSMUST00000120597 404 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm12494-201ENSMUST00000121684 521 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm22026-201ENSMUST00000122735 281 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm25962-201ENSMUST00000157173 168 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm24997-201ENSMUST00000157910 105 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm25615-201ENSMUST00000177836 94 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm27887-201ENSMUST00000184367 102 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm27414-201ENSMUST00000185033 381 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm37784-201ENSMUST00000193233 189 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm43704-201ENSMUST00000196164 496 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm43978-201ENSMUST00000203491 451 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm44184-201ENSMUST00000204290 132 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 AC160134.1-201ENSMUST00000213450 551 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm5229-201ENSMUST00000039375 354 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm22294-201ENSMUST00000083308 104 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Mir133a-2-201ENSMUST00000083526 104 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nubp1Q9R060 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.24□□□□□ -1.57
Nubp1Q9R060 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm26078-201ENSMUST00000104067 128 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm14067-201ENSMUST00000119340 314 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm14601-201ENSMUST00000120892 236 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm24720-201ENSMUST00000157518 166 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm25599-201ENSMUST00000157816 103 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm25489-201ENSMUST00000158727 141 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm5258-201ENSMUST00000165437 327 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm17511-201ENSMUST00000172206 342 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm24084-201ENSMUST00000175173 137 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm45420-201ENSMUST00000211243 425 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 AC124182.1-201ENSMUST00000227091 321 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm25682-201ENSMUST00000083942 164 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm42659-201ENSMUST00000196955 1754 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.23□□□□□ -1.57
Nubp1Q9R060 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Nubp1Q9R060 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.22□□□□□ -1.57
Nubp1Q9R060 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nubp1Q9R060 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms