Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 n-R5s52-201ENSMUST00000104614 113 ntBASIC2.94□□□□□ -1.94
Scn11aQ9R053 Mir344e-201ENSMUST00000104677 66 ntBASIC2.94□□□□□ -1.94
Scn11aQ9R053 Gm15844-201ENSMUST00000118016 576 ntBASIC2.94□□□□□ -1.94
Scn11aQ9R053 Gm13314-201ENSMUST00000118742 335 ntBASIC2.94□□□□□ -1.94
Scn11aQ9R053 Gm2979-201ENSMUST00000193442 463 ntBASIC2.94□□□□□ -1.94
Scn11aQ9R053 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.94□□□□□ -1.94
Scn11aQ9R053 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Scn11aQ9R053 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Scn11aQ9R053 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.94□□□□□ -1.94
Scn11aQ9R053 Gm25628-201ENSMUST00000084002 105 ntBASIC2.94□□□□□ -1.94
Scn11aQ9R053 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.94□□□□□ -1.94
Scn11aQ9R053 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Scn11aQ9R053 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Scn11aQ9R053 Gm12871-201ENSMUST00000118758 438 ntBASIC2.93□□□□□ -1.94
Scn11aQ9R053 Gm15162-201ENSMUST00000119325 283 ntBASIC2.93□□□□□ -1.94
Scn11aQ9R053 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.93□□□□□ -1.94
Scn11aQ9R053 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Scn11aQ9R053 Gm23714-201ENSMUST00000179259 105 ntBASIC2.93□□□□□ -1.94
Scn11aQ9R053 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Scn11aQ9R053 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC2.93□□□□□ -1.94
Scn11aQ9R053 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.93□□□□□ -1.94
Scn11aQ9R053 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Scn11aQ9R053 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Scn11aQ9R053 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Scn11aQ9R053 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm14977-201ENSMUST00000121626 812 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm27163-201ENSMUST00000184767 409 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Scn11aQ9R053 AC126554.4-201ENSMUST00000221055 409 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Scn11aQ9R053 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Scn11aQ9R053 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.92□□□□□ -1.94
Scn11aQ9R053 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm7974-201ENSMUST00000117154 408 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm13687-201ENSMUST00000119857 282 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm14957-201ENSMUST00000121069 817 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Scn11aQ9R053 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm22108-201ENSMUST00000177961 106 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm24798-201ENSMUST00000179334 106 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm28627-201ENSMUST00000186141 453 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm43722-201ENSMUST00000196054 124 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Scn11aQ9R053 Mir497-201ENSMUST00000200557 84 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm30674-201ENSMUST00000214523 392 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm7214-201ENSMUST00000222428 272 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.92□□□□□ -1.94
Scn11aQ9R053 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Scn11aQ9R053 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Scn11aQ9R053 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm43486-201ENSMUST00000196431 4339 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm14119-201ENSMUST00000119511 235 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm12042-201ENSMUST00000120479 301 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm26411-201ENSMUST00000157668 107 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Mir669n-201ENSMUST00000158636 54 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm22192-201ENSMUST00000175128 85 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm45105-201ENSMUST00000207824 397 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm18453-201ENSMUST00000208000 626 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm17890-201ENSMUST00000221419 757 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Scn11aQ9R053 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Scn11aQ9R053 Gm25632-201ENSMUST00000083112 85 ntBASIC2.91□□□□□ -1.94
Scn11aQ9R053 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Scn11aQ9R053 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Scn11aQ9R053 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Scn11aQ9R053 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Scn11aQ9R053 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.9□□□□□ -1.94
Scn11aQ9R053 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Scn11aQ9R053 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC2.9□□□□□ -1.94
Scn11aQ9R053 Gm45380-201ENSMUST00000210465 315 ntBASIC2.9□□□□□ -1.94
Scn11aQ9R053 Gm18704-201ENSMUST00000219736 446 ntBASIC2.9□□□□□ -1.94
Scn11aQ9R053 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.9□□□□□ -1.95
Scn11aQ9R053 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.9□□□□□ -1.95
Scn11aQ9R053 Mir758-201ENSMUST00000103260 81 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm14793-201ENSMUST00000118739 311 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm17183-201ENSMUST00000171170 493 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm8031-201ENSMUST00000213430 626 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Scn11aQ9R053 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Scn11aQ9R053 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm22149-201ENSMUST00000104442 136 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm15399-201ENSMUST00000118055 724 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 Gm25902-201ENSMUST00000158493 318 ntBASIC2.89□□□□□ -1.95
Scn11aQ9R053 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms