Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Gm7726-201ENSMUST00000206241 231 ntBASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Gm44938-201ENSMUST00000208614 427 ntBASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Gm17766-201ENSMUST00000209223 442 ntBASIC4.87□□□□□ -1.63
Trim39Q9ESN2 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.87□□□□□ -1.63
Trim39Q9ESN2 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.87□□□□□ -1.63
Trim39Q9ESN2 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm13681-201ENSMUST00000117925 210 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm11698-201ENSMUST00000117948 455 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm13787-201ENSMUST00000120422 168 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm26350-201ENSMUST00000157531 288 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm20526-201ENSMUST00000173416 158 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm28389-201ENSMUST00000190090 697 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm30280-201ENSMUST00000192214 262 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm19243-201ENSMUST00000198592 269 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm42663-201ENSMUST00000199883 351 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm42453-201ENSMUST00000200477 409 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm45296-201ENSMUST00000209625 205 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm45859-201ENSMUST00000212794 214 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm46194-201ENSMUST00000218136 320 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm25818-201ENSMUST00000083282 164 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Trim39Q9ESN2 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.86□□□□□ -1.63
Trim39Q9ESN2 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm26147-201ENSMUST00000104479 114 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm14657-201ENSMUST00000117461 302 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm12721-201ENSMUST00000120621 268 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm5379-201ENSMUST00000120973 826 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm14768-201ENSMUST00000122126 678 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm23557-201ENSMUST00000157820 138 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm22381-201ENSMUST00000158186 107 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Mir6346-201ENSMUST00000183982 81 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm8242-202ENSMUST00000193056 475 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm35648-201ENSMUST00000202304 475 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm19195-201ENSMUST00000222018 511 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm22456-201ENSMUST00000082578 125 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Snord14e-201ENSMUST00000082857 90 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim39Q9ESN2 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms