Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm22072-201ENSMUST00000116850 121 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm2066-201ENSMUST00000118046 389 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm12137-201ENSMUST00000119565 346 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm2318-201ENSMUST00000119623 639 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm16100-201ENSMUST00000120489 231 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm2005-201ENSMUST00000120759 542 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm23865-201ENSMUST00000157723 97 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Snord53-201ENSMUST00000175146 78 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm7438-201ENSMUST00000177664 639 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm7408-201ENSMUST00000178014 639 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm7386-201ENSMUST00000178020 639 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm3657-201ENSMUST00000178170 639 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm7415-201ENSMUST00000178205 639 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm7398-201ENSMUST00000178589 639 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm7391-201ENSMUST00000178680 639 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm7375-201ENSMUST00000179232 639 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm3681-201ENSMUST00000179940 639 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm37288-201ENSMUST00000193963 334 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 AC153801.1-201ENSMUST00000217904 947 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm46194-201ENSMUST00000218136 320 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm23847-201ENSMUST00000083829 110 ntBASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Lima1Q9ERG0 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm42968-201ENSMUST00000198578 1372 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm13349-201ENSMUST00000118436 411 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm14901-201ENSMUST00000119001 283 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm3835-201ENSMUST00000120752 403 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm26088-201ENSMUST00000157896 131 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm25224-201ENSMUST00000158195 68 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Mir5136-201ENSMUST00000175573 76 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm43217-201ENSMUST00000199513 367 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm19232-201ENSMUST00000211621 652 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm22970-201ENSMUST00000083304 186 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.77□□□□□ -1.97
Lima1Q9ERG0 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Lima1Q9ERG0 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm14627-201ENSMUST00000118931 567 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm12001-201ENSMUST00000121727 913 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm11344-201ENSMUST00000122011 335 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm22651-201ENSMUST00000157872 94 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm22416-201ENSMUST00000158590 88 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm25119-201ENSMUST00000158815 88 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm15974-201ENSMUST00000159103 531 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm23053-201ENSMUST00000175136 96 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Snord93-201ENSMUST00000175580 71 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm45742-201ENSMUST00000212400 433 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 AC154730.1-201ENSMUST00000227874 816 ntBASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Lima1Q9ERG0 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm25647-201ENSMUST00000101832 78 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm25823-201ENSMUST00000101995 78 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm22939-201ENSMUST00000103958 131 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm26341-201ENSMUST00000104561 134 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.75□□□□□ -1.97
Lima1Q9ERG0 Gm11367-201ENSMUST00000117802 120 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms