Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm12268-201ENSMUST00000118398 442 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm15195-201ENSMUST00000118775 263 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm22478-201ENSMUST00000122570 154 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm17117-201ENSMUST00000163665 299 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm24754-201ENSMUST00000177997 107 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm28552-201ENSMUST00000190725 388 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm37213-201ENSMUST00000193077 586 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm37288-201ENSMUST00000193963 334 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm37576-201ENSMUST00000194228 372 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm19126-201ENSMUST00000207896 509 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm9373-201ENSMUST00000208724 599 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc39Q9D5Y1 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
Ccdc39Q9D5Y1 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.71□□□□□ -1.81
Ccdc39Q9D5Y1 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm9440-201ENSMUST00000119667 539 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14162-201ENSMUST00000121985 601 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm25066-201ENSMUST00000158145 123 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm18520-201ENSMUST00000174783 658 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm28002-201ENSMUST00000184832 100 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm28358-202ENSMUST00000189292 223 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm20915-201ENSMUST00000191575 663 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm8074-201ENSMUST00000095071 252 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.71□□□□□ -1.82
Ccdc39Q9D5Y1 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm25414-201ENSMUST00000101814 107 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm15108-201ENSMUST00000116160 803 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm13341-201ENSMUST00000120780 672 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm13502-201ENSMUST00000121574 684 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm15111-201ENSMUST00000122142 878 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm25490-201ENSMUST00000158734 130 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm26061-201ENSMUST00000175584 108 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm6501-201ENSMUST00000187178 916 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm29516-201ENSMUST00000190402 468 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm35570-201ENSMUST00000198730 681 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm45551-201ENSMUST00000211459 928 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm5471-201ENSMUST00000072732 337 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms