Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm16017-201ENSMUST00000119834 208 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm14765-201ENSMUST00000121954 326 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm25156-201ENSMUST00000179809 79 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm24518-201ENSMUST00000180275 94 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm27521-201ENSMUST00000184022 64 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm27747-201ENSMUST00000184707 85 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm19637-201ENSMUST00000185933 579 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm29665-201ENSMUST00000191457 528 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm42666-201ENSMUST00000201954 152 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm44816-201ENSMUST00000206666 477 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Mir188-201ENSMUST00000083464 68 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Gm23796-201ENSMUST00000084011 160 ntBASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim11Q99PQ2 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm14570-201ENSMUST00000119444 391 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm11582-201ENSMUST00000121041 236 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm13007-201ENSMUST00000121866 365 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm16345-201ENSMUST00000146065 158 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm24858-201ENSMUST00000158058 323 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm26318-201ENSMUST00000176507 96 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm23966-201ENSMUST00000179823 107 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Mir6344-201ENSMUST00000183462 104 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm19498-201ENSMUST00000191128 331 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm29014-201ENSMUST00000191422 326 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Igkv2-105-201ENSMUST00000196931 377 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm18007-201ENSMUST00000205019 844 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm19790-201ENSMUST00000214414 251 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm24410-201ENSMUST00000083433 107 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim11Q99PQ2 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Mir147-201ENSMUST00000102354 79 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm25915-201ENSMUST00000104265 126 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm3267-201ENSMUST00000118671 473 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm14287-201ENSMUST00000121060 117 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm22958-201ENSMUST00000122512 184 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm12854-201ENSMUST00000128518 297 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm9022-202ENSMUST00000183285 483 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm8939-201ENSMUST00000192577 964 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm18384-201ENSMUST00000195974 808 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm42643-201ENSMUST00000200504 279 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm45032-201ENSMUST00000205375 520 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm5955-201ENSMUST00000222712 219 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm7665-201ENSMUST00000076710 297 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Gm23055-201ENSMUST00000082805 94 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Trim11Q99PQ2 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms