Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm26993-201ENSMUST00000182766 789 ntBASIC2.24□□□□□ -2.05
Cdh23Q99PF4 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Cdh23Q99PF4 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Cdh23Q99PF4 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Gm14602-201ENSMUST00000118625 340 ntBASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Gm6615-201ENSMUST00000199426 631 ntBASIC2.24□□□□□ -2.05
Cdh23Q99PF4 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Gm2544-201ENSMUST00000222702 756 ntBASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Gm25202-201ENSMUST00000082838 191 ntBASIC2.24□□□□□ -2.05
Cdh23Q99PF4 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC2.23□□□□□ -2.05
Cdh23Q99PF4 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Gm44849-201ENSMUST00000207595 484 ntBASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Gm14957-201ENSMUST00000121069 817 ntBASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Cdh23Q99PF4 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Gm17194-201ENSMUST00000164610 348 ntBASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Gm28794-201ENSMUST00000185276 136 ntBASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.22□□□□□ -2.05
Cdh23Q99PF4 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Gm12432-201ENSMUST00000119540 186 ntBASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Gm43655-201ENSMUST00000197367 222 ntBASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.22□□□□□ -2.05
Cdh23Q99PF4 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.22□□□□□ -2.05
Cdh23Q99PF4 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Cdh23Q99PF4 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm23902-201ENSMUST00000157571 134 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm36298-201ENSMUST00000223394 1732 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm15225-201ENSMUST00000120449 1017 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm24076-201ENSMUST00000158179 94 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm22159-201ENSMUST00000158412 130 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm19257-201ENSMUST00000186121 183 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm37455-201ENSMUST00000191993 529 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm24984-201ENSMUST00000104454 133 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm18346-201ENSMUST00000216782 325 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cdh23Q99PF4 Gm18727-201ENSMUST00000185981 553 ntBASIC2.2□□□□□ -2.06
Cdh23Q99PF4 Gm28404-201ENSMUST00000190242 453 ntBASIC2.2□□□□□ -2.06
Cdh23Q99PF4 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.2□□□□□ -2.06
Cdh23Q99PF4 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Cdh23Q99PF4 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.2□□□□□ -2.06
Cdh23Q99PF4 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Cdh23Q99PF4 Gm14794-201ENSMUST00000118181 192 ntBASIC2.2□□□□□ -2.06
Cdh23Q99PF4 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.2□□□□□ -2.06
Cdh23Q99PF4 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Cdh23Q99PF4 Gm42484-201ENSMUST00000196075 2104 ntBASIC2.2□□□□□ -2.06
Cdh23Q99PF4 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Snord53-201ENSMUST00000175146 78 ntBASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Gm7984-201ENSMUST00000060640 538 ntBASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Gm25628-201ENSMUST00000084002 105 ntBASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Gm42996-201ENSMUST00000196116 1636 ntBASIC2.19□□□□□ -2.06
Cdh23Q99PF4 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Gm22716-201ENSMUST00000177596 107 ntBASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Gm8031-201ENSMUST00000213430 626 ntBASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Gm24098-201ENSMUST00000102075 109 ntBASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Gm25381-201ENSMUST00000102078 109 ntBASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Mir592-201ENSMUST00000102113 96 ntBASIC2.19□□□□□ -2.06
Cdh23Q99PF4 Mir6985-201ENSMUST00000184641 61 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms