Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm25967-201ENSMUST00000157168 147 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm25637-201ENSMUST00000157529 107 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm26310-201ENSMUST00000157766 117 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm22968-201ENSMUST00000157955 118 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm22243-201ENSMUST00000178754 120 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm22917-201ENSMUST00000180116 110 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm24518-201ENSMUST00000180275 94 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm9687-201ENSMUST00000189312 602 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm42814-201ENSMUST00000199370 460 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm44871-201ENSMUST00000207821 497 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm45101-201ENSMUST00000208327 232 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm45236-201ENSMUST00000208632 229 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm45498-201ENSMUST00000210346 283 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Mir21a-201ENSMUST00000083521 92 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Mir202-201ENSMUST00000083568 72 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm42986-201ENSMUST00000201618 3385 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm5925-201ENSMUST00000105016 1497 ntBASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
H1fooQ8VIK3 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm45137-201ENSMUST00000208652 4415 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm13331-201ENSMUST00000117500 448 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm12787-201ENSMUST00000119234 396 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm13475-201ENSMUST00000119290 234 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm15014-201ENSMUST00000120742 258 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 AA413626-201ENSMUST00000121125 494 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm10059-201ENSMUST00000131139 171 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm25603-201ENSMUST00000158361 105 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm27999-201ENSMUST00000183539 193 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm29134-201ENSMUST00000186579 126 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm28661-201ENSMUST00000188231 681 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm8599-201ENSMUST00000193033 457 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm43631-201ENSMUST00000202011 369 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm45402-201ENSMUST00000211796 223 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm19219-201ENSMUST00000215863 724 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 AC164437.2-201ENSMUST00000228915 797 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Apoo-ps-201ENSMUST00000061241 586 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm24037-201ENSMUST00000082871 180 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H1fooQ8VIK3 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
H1fooQ8VIK3 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Gm24117-201ENSMUST00000103973 133 ntBASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Gm22899-201ENSMUST00000104540 131 ntBASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Gm15988-201ENSMUST00000118677 367 ntBASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Gm11366-201ENSMUST00000119279 429 ntBASIC3.69□□□□□ -1.82
H1fooQ8VIK3 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms