Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm20773-201ENSMUST00000178940 681 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm23089-201ENSMUST00000178947 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm22046-201ENSMUST00000179027 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Snord116l10-201ENSMUST00000179053 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm26365-201ENSMUST00000179177 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm23767-201ENSMUST00000179278 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm24153-201ENSMUST00000179280 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm25597-201ENSMUST00000179388 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Snord116l1-201ENSMUST00000179518 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm22941-201ENSMUST00000179630 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm22631-201ENSMUST00000179656 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm25816-201ENSMUST00000179764 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Snord116l14-201ENSMUST00000179875 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Snord116l8-201ENSMUST00000179889 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Snord116l7-201ENSMUST00000179895 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Snord116l5-201ENSMUST00000179927 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Snord116l6-201ENSMUST00000179955 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm26188-201ENSMUST00000179963 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm25471-201ENSMUST00000180126 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm26433-201ENSMUST00000180227 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Snord116l11-201ENSMUST00000180312 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm23862-201ENSMUST00000180342 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm22128-201ENSMUST00000180346 94 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Trbv22-201ENSMUST00000191697 291 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm37098-201ENSMUST00000192290 244 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm43239-201ENSMUST00000200131 201 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm44989-201ENSMUST00000204749 217 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm3565-201ENSMUST00000222670 609 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm26111-201ENSMUST00000083969 106 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm38090-201ENSMUST00000195733 1942 ntBASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc9Q8VC31 Gm43404-201ENSMUST00000200424 2534 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm25943-201ENSMUST00000103791 90 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Mir466b-7-201ENSMUST00000103804 88 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Mir466b-5-201ENSMUST00000103900 88 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm22657-201ENSMUST00000104197 132 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Mir465c-2-201ENSMUST00000104757 81 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm15108-201ENSMUST00000116160 803 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm14197-201ENSMUST00000117480 1049 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm12370-201ENSMUST00000117809 604 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm11512-201ENSMUST00000119669 663 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm4852-201ENSMUST00000121202 729 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm14589-201ENSMUST00000121640 727 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm14916-201ENSMUST00000121904 204 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm11254-201ENSMUST00000122368 653 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 n-R5s207-201ENSMUST00000122497 118 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm24444-201ENSMUST00000157244 308 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm23257-201ENSMUST00000158322 132 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Mir466b-4-201ENSMUST00000178801 90 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm25285-201ENSMUST00000178951 90 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm4076-201ENSMUST00000179230 965 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Mir466b-6-201ENSMUST00000180061 90 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Mir466c-2-201ENSMUST00000180211 90 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm38075-201ENSMUST00000191979 920 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm37428-201ENSMUST00000193886 137 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm42958-201ENSMUST00000197595 318 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm19457-201ENSMUST00000200995 448 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm19244-201ENSMUST00000204340 253 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm7039-201ENSMUST00000205138 346 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm18729-201ENSMUST00000217230 621 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm35558-202ENSMUST00000221819 499 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm23242-201ENSMUST00000083055 107 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Gm25578-201ENSMUST00000083406 104 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc9Q8VC31 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms