Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm23503-201ENSMUST00000083903 107 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ushbp1Q8R370 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm12386-201ENSMUST00000117380 688 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm6923-201ENSMUST00000118343 406 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm5060-201ENSMUST00000120072 599 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm6373-201ENSMUST00000121026 360 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm24505-201ENSMUST00000157682 126 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm24537-201ENSMUST00000157950 102 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm3191-201ENSMUST00000167139 346 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm44354-201ENSMUST00000196017 143 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm43559-201ENSMUST00000198755 466 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm8132-201ENSMUST00000204938 640 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm19366-201ENSMUST00000206996 156 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm45049-201ENSMUST00000207586 591 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm18703-201ENSMUST00000215318 333 ntBASIC4.68□□□□□ -1.66
Ushbp1Q8R370 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ushbp1Q8R370 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm13806-201ENSMUST00000117822 325 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm14292-201ENSMUST00000118761 456 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm13064-201ENSMUST00000119125 557 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm14574-201ENSMUST00000120644 279 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Mir1898-201ENSMUST00000122643 83 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm25434-201ENSMUST00000158278 167 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm23028-201ENSMUST00000158773 265 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm17159-201ENSMUST00000169043 482 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm21737-201ENSMUST00000178112 664 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm20874-201ENSMUST00000178356 663 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm21744-201ENSMUST00000178403 662 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm20901-201ENSMUST00000180177 664 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm27899-201ENSMUST00000184715 64 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm28263-201ENSMUST00000185884 400 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm5116-201ENSMUST00000187732 463 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm29627-201ENSMUST00000187984 463 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm28090-201ENSMUST00000189458 664 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm21647-201ENSMUST00000189755 664 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Gm44583-201ENSMUST00000207478 281 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ushbp1Q8R370 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm24788-201ENSMUST00000104283 156 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm13687-201ENSMUST00000119857 282 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm9003-201ENSMUST00000121810 482 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm9225-201ENSMUST00000121921 836 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm12095-201ENSMUST00000121962 816 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm23538-201ENSMUST00000157535 101 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm25706-201ENSMUST00000157828 247 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm23583-201ENSMUST00000158533 289 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm24520-201ENSMUST00000179510 110 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm28843-201ENSMUST00000189198 678 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm29546-201ENSMUST00000191171 678 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms