Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm7041-201ENSMUST00000201227 524 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm29754-201ENSMUST00000206269 358 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm16431-201ENSMUST00000117454 431 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm15951-201ENSMUST00000118377 400 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm15313-201ENSMUST00000119179 282 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm14442-201ENSMUST00000119690 1736 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm12543-201ENSMUST00000120410 543 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm6591-201ENSMUST00000121063 434 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm22345-201ENSMUST00000122644 107 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm2020-201ENSMUST00000145242 579 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm26005-201ENSMUST00000158802 134 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm17946-201ENSMUST00000186856 538 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm29408-201ENSMUST00000187536 216 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm9722-201ENSMUST00000194568 802 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm37791-201ENSMUST00000195081 286 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm42828-201ENSMUST00000199669 469 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm5551-201ENSMUST00000199720 690 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm20304-201ENSMUST00000218168 444 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Mir193a-201ENSMUST00000083461 66 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm24446-201ENSMUST00000083982 156 ntBASIC4.59□□□□□ -1.67
Vps53Q8CCB4 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Vps53Q8CCB4 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Vps53Q8CCB4 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Vps53Q8CCB4 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.59□□□□□ -1.68
Vps53Q8CCB4 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm14125-201ENSMUST00000113442 680 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm14282-201ENSMUST00000119484 240 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm13356-201ENSMUST00000121678 335 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm14473-201ENSMUST00000122269 557 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm24836-201ENSMUST00000122609 108 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm26276-201ENSMUST00000157099 109 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm25163-201ENSMUST00000158905 104 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm23365-201ENSMUST00000175019 125 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm25960-201ENSMUST00000175110 125 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm44453-201ENSMUST00000175161 126 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm25195-201ENSMUST00000177656 126 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm27676-201ENSMUST00000183669 61 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm37416-201ENSMUST00000193596 318 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm42451-201ENSMUST00000197410 244 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm4644-201ENSMUST00000197587 400 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm44465-201ENSMUST00000199536 114 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm44611-201ENSMUST00000207507 355 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm4528-201ENSMUST00000207905 551 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm45400-201ENSMUST00000211603 653 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 AC145736.1-201ENSMUST00000214661 479 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 AC109172.1-201ENSMUST00000227503 187 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Vps53Q8CCB4 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms