Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm45236-201ENSMUST00000208632 229 ntBASIC5.64□□□□□ -1.51
Trim47Q8C0E3 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.64□□□□□ -1.51
Trim47Q8C0E3 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.64□□□□□ -1.51
Trim47Q8C0E3 Gm5899-201ENSMUST00000071770 270 ntBASIC5.64□□□□□ -1.51
Trim47Q8C0E3 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim47Q8C0E3 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim47Q8C0E3 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim47Q8C0E3 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim47Q8C0E3 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim47Q8C0E3 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 AC115047.2-201ENSMUST00000214421 1848 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm23948-201ENSMUST00000104030 132 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm22778-201ENSMUST00000104090 128 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm15162-201ENSMUST00000119325 283 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm27285-201ENSMUST00000183875 127 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm29352-201ENSMUST00000188054 544 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm17954-201ENSMUST00000195893 607 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm43214-201ENSMUST00000199242 352 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm45815-201ENSMUST00000220241 146 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 AC241593.1-201ENSMUST00000224768 397 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 AC125223.1-203ENSMUST00000225304 498 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim47Q8C0E3 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm42481-201ENSMUST00000196822 2178 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 n-R5s202-201ENSMUST00000104517 114 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm11576-201ENSMUST00000117433 417 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm13903-201ENSMUST00000120945 193 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm13153-201ENSMUST00000120969 637 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm25293-201ENSMUST00000122792 285 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm12854-201ENSMUST00000128518 297 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm16345-201ENSMUST00000146065 158 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm25278-201ENSMUST00000157267 120 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm23327-201ENSMUST00000157420 78 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm16125-201ENSMUST00000159003 339 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm27818-201ENSMUST00000184536 159 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm27545-201ENSMUST00000184755 202 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm5002-201ENSMUST00000207145 223 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm17999-201ENSMUST00000211568 542 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm45710-201ENSMUST00000212847 215 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm7665-201ENSMUST00000076710 297 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm23796-201ENSMUST00000084011 160 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Gm5347-201ENSMUST00000210542 2327 ntBASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim47Q8C0E3 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms