Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm45614-201ENSMUST00000209994 721 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 AC152979.1-201ENSMUST00000218214 289 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim56Q80VI1 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.29□□□□□ -1.56
Trim56Q80VI1 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim56Q80VI1 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm12235-201ENSMUST00000118596 170 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm14352-201ENSMUST00000119250 449 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm13717-201ENSMUST00000119868 365 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm15112-201ENSMUST00000120152 860 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm23213-201ENSMUST00000122715 313 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm24780-201ENSMUST00000157635 143 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm22633-201ENSMUST00000179834 107 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Mir6963-201ENSMUST00000183535 71 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm27805-201ENSMUST00000184513 79 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm44765-201ENSMUST00000206927 601 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm43896-201ENSMUST00000203440 2032 ntBASIC5.28□□□□□ -1.56
Trim56Q80VI1 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim56Q80VI1 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim56Q80VI1 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim56Q80VI1 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm25316-201ENSMUST00000116826 118 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm11698-201ENSMUST00000117948 455 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm12719-201ENSMUST00000118859 241 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm14570-201ENSMUST00000119444 391 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm15022-201ENSMUST00000122074 746 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm10059-201ENSMUST00000131139 171 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm23743-201ENSMUST00000157389 274 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm26960-201ENSMUST00000182263 412 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm9320-201ENSMUST00000184151 473 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm28257-201ENSMUST00000185244 463 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm37603-201ENSMUST00000192368 219 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm44083-201ENSMUST00000203114 337 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.27□□□□□ -1.57
Trim56Q80VI1 AC124346.1-201ENSMUST00000218539 364 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm9616-201ENSMUST00000221154 781 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm26263-201ENSMUST00000083281 164 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm23099-201ENSMUST00000083454 139 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.27□□□□□ -1.57
Trim56Q80VI1 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5.27□□□□□ -1.57
Trim56Q80VI1 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim56Q80VI1 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm5757-201ENSMUST00000117494 528 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm11794-201ENSMUST00000119446 237 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm24636-201ENSMUST00000158673 288 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm25447-201ENSMUST00000158997 128 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm16545-201ENSMUST00000161968 463 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm13249-201ENSMUST00000177803 345 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm13144-201ENSMUST00000179385 345 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm28163-201ENSMUST00000187099 325 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm44389-201ENSMUST00000203795 182 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm44523-201ENSMUST00000205616 417 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm19126-201ENSMUST00000207896 509 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm19326-201ENSMUST00000219818 326 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms