Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm18453-201ENSMUST00000208000 626 ntBASIC3.34□□□□□ -1.87
Topbp1Q6ZQF0 Gm45072-201ENSMUST00000208673 929 ntBASIC3.34□□□□□ -1.87
Topbp1Q6ZQF0 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.34□□□□□ -1.87
Topbp1Q6ZQF0 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Topbp1Q6ZQF0 Gm43473-201ENSMUST00000200442 5997 ntBASIC3.34□□□□□ -1.87
Topbp1Q6ZQF0 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.34□□□□□ -1.87
Topbp1Q6ZQF0 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Topbp1Q6ZQF0 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Topbp1Q6ZQF0 Snora36b-201ENSMUST00000104383 132 ntBASIC3.34□□□□□ -1.88
Topbp1Q6ZQF0 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.34□□□□□ -1.88
Topbp1Q6ZQF0 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Topbp1Q6ZQF0 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Topbp1Q6ZQF0 Gm15019-201ENSMUST00000120148 434 ntBASIC3.34□□□□□ -1.88
Topbp1Q6ZQF0 Gm23585-201ENSMUST00000157656 102 ntBASIC3.34□□□□□ -1.88
Topbp1Q6ZQF0 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.34□□□□□ -1.88
Topbp1Q6ZQF0 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.34□□□□□ -1.88
Topbp1Q6ZQF0 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC3.34□□□□□ -1.88
Topbp1Q6ZQF0 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.34□□□□□ -1.88
Topbp1Q6ZQF0 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 Gm24671-201ENSMUST00000104159 158 ntBASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 Gm27443-201ENSMUST00000184660 98 ntBASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 Gm27991-201ENSMUST00000184804 137 ntBASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 Gm5268-201ENSMUST00000189212 940 ntBASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 Mir142-201ENSMUST00000198092 64 ntBASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Topbp1Q6ZQF0 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm10997-201ENSMUST00000210294 1500 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm23942-201ENSMUST00000101956 107 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm13755-201ENSMUST00000118509 305 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm15195-201ENSMUST00000118775 263 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm13406-201ENSMUST00000121991 256 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm24010-201ENSMUST00000157731 282 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm28923-201ENSMUST00000187755 322 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm21742-201ENSMUST00000189352 548 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm44703-201ENSMUST00000205724 248 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm45382-201ENSMUST00000210607 151 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Topbp1Q6ZQF0 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Mir542-201ENSMUST00000102186 85 ntBASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 n-R5s164-201ENSMUST00000122664 112 ntBASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Trav20-201ENSMUST00000142754 347 ntBASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Gm5263-201ENSMUST00000163646 601 ntBASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Gm43415-201ENSMUST00000201934 750 ntBASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Topbp1Q6ZQF0 Gm37895-201ENSMUST00000192448 4550 ntBASIC3.3□□□□□ -1.88
Topbp1Q6ZQF0 Gm12042-201ENSMUST00000120479 301 ntBASIC3.3□□□□□ -1.88
Topbp1Q6ZQF0 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.3□□□□□ -1.88
Topbp1Q6ZQF0 Gm44060-201ENSMUST00000204440 410 ntBASIC3.3□□□□□ -1.88
Topbp1Q6ZQF0 Gm17838-201ENSMUST00000205872 876 ntBASIC3.3□□□□□ -1.88
Topbp1Q6ZQF0 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.3□□□□□ -1.88
Topbp1Q6ZQF0 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Topbp1Q6ZQF0 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Topbp1Q6ZQF0 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.3□□□□□ -1.88
Topbp1Q6ZQF0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC3.3□□□□□ -1.88
Topbp1Q6ZQF0 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm23600-201ENSMUST00000157260 71 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm24601-201ENSMUST00000157970 143 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm22947-201ENSMUST00000158559 91 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm22698-201ENSMUST00000175375 108 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm19252-201ENSMUST00000204705 305 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm5655-201ENSMUST00000221078 901 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm14119-201ENSMUST00000119511 235 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm24885-201ENSMUST00000158783 270 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm16561-201ENSMUST00000163001 192 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm20542-201ENSMUST00000174582 372 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm29552-201ENSMUST00000190548 660 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm19269-201ENSMUST00000211401 804 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm18043-201ENSMUST00000216741 739 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm7588-201ENSMUST00000216866 571 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Topbp1Q6ZQF0 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms