Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.68□□□□□ -1.66
Cpsf6Q6NVF9 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.68□□□□□ -1.66
Cpsf6Q6NVF9 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cpsf6Q6NVF9 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm12311-201ENSMUST00000118803 374 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm13153-201ENSMUST00000120969 637 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm27410-201ENSMUST00000183851 115 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm7825-201ENSMUST00000204046 416 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm8319-201ENSMUST00000205708 641 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm6112-201ENSMUST00000208037 629 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm19790-201ENSMUST00000214414 251 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Gm23845-201ENSMUST00000083834 152 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.67□□□□□ -1.66
Cpsf6Q6NVF9 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm23422-201ENSMUST00000102000 107 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm13451-201ENSMUST00000117649 592 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm13491-201ENSMUST00000118267 235 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm13876-201ENSMUST00000118451 261 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm12156-201ENSMUST00000119188 554 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm15493-201ENSMUST00000119461 528 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm12779-201ENSMUST00000121496 143 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm25624-201ENSMUST00000157222 275 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm22849-201ENSMUST00000157713 307 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm17020-201ENSMUST00000172274 274 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Mir6336-201ENSMUST00000183581 130 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm29014-201ENSMUST00000191422 326 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm33654-201ENSMUST00000221704 215 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm26497-201ENSMUST00000083146 107 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm23455-201ENSMUST00000083331 100 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cpsf6Q6NVF9 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.65□□□□□ -1.66
Cpsf6Q6NVF9 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.65□□□□□ -1.66
Cpsf6Q6NVF9 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Cpsf6Q6NVF9 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cpsf6Q6NVF9 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Cpsf6Q6NVF9 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.65□□□□□ -1.66
Cpsf6Q6NVF9 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Cpsf6Q6NVF9 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Mir1188-201ENSMUST00000116756 120 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm15026-201ENSMUST00000119219 458 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm13867-201ENSMUST00000120844 395 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm12486-201ENSMUST00000120887 541 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm23537-201ENSMUST00000157536 330 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Mir3110-201ENSMUST00000175053 80 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Mir7653-201ENSMUST00000184358 61 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm27997-201ENSMUST00000184942 69 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm28389-201ENSMUST00000190090 697 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm28921-201ENSMUST00000190219 378 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm38053-201ENSMUST00000193938 160 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm6059-201ENSMUST00000196903 340 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm18007-201ENSMUST00000205019 844 ntBASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Cpsf6Q6NVF9 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms