Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm14927-201ENSMUST00000120283 454 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm12924-201ENSMUST00000121747 318 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm7846-201ENSMUST00000145844 274 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm25970-201ENSMUST00000157165 86 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm23602-201ENSMUST00000157258 132 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm23753-201ENSMUST00000157575 149 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm23583-201ENSMUST00000158533 289 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm17153-201ENSMUST00000171314 490 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm20399-201ENSMUST00000174652 132 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm28010-201ENSMUST00000179485 126 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm10193-201ENSMUST00000188288 231 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm44373-201ENSMUST00000196112 169 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm36382-201ENSMUST00000198892 541 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm43825-201ENSMUST00000199650 734 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm44149-201ENSMUST00000204256 226 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm18644-201ENSMUST00000211458 815 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm22155-201ENSMUST00000083836 162 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Trim28Q62318 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim28Q62318 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.97□□□□□ -1.61
Trim28Q62318 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.96□□□□□ -1.61
Trim28Q62318 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Trim28Q62318 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Trim28Q62318 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Trim28Q62318 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Trim28Q62318 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Trim28Q62318 Mir467h-201ENSMUST00000116759 121 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Mir1193-201ENSMUST00000116761 121 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Gm11673-201ENSMUST00000117846 331 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.96□□□□□ -1.62
Trim28Q62318 Gm22840-201ENSMUST00000158444 136 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Gm25902-201ENSMUST00000158493 318 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.96□□□□□ -1.62
Trim28Q62318 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Trim28Q62318 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Trim28Q62318 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim28Q62318 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Trim28Q62318 Gm36934-201ENSMUST00000192007 306 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Gm37616-201ENSMUST00000193974 322 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Gm42805-201ENSMUST00000196158 276 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Gm43814-201ENSMUST00000197851 413 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Gm43039-201ENSMUST00000202883 963 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Gm44055-201ENSMUST00000204376 247 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Gm44294-201ENSMUST00000205090 728 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Gm45312-201ENSMUST00000210566 311 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trim28Q62318 AC154328.1-201ENSMUST00000225875 307 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.96□□□□□ -1.62
Trim28Q62318 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Trim28Q62318 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.96□□□□□ -1.62
Trim28Q62318 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
Trim28Q62318 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim28Q62318 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Trim28Q62318 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trim28Q62318 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Trim28Q62318 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim28Q62318 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim28Q62318 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trim28Q62318 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim28Q62318 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim28Q62318 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trim28Q62318 Gm14385-201ENSMUST00000116315 876 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim28Q62318 Gm12803-201ENSMUST00000118907 821 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm12607-201ENSMUST00000120724 493 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm25105-201ENSMUST00000122477 130 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm23540-201ENSMUST00000157543 164 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm25163-201ENSMUST00000158905 104 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim28Q62318 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim28Q62318 Gm26426-201ENSMUST00000177866 123 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm23619-201ENSMUST00000178411 94 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm25474-201ENSMUST00000179052 94 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Trim28Q62318 Gm22047-201ENSMUST00000179176 94 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm26060-201ENSMUST00000180094 123 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm27796-201ENSMUST00000183863 261 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms