Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm37579-201ENSMUST00000194291 142 ntBASIC2.67□□□□□ -1.98
Col11a1Q61245 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col11a1Q61245 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col11a1Q61245 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col11a1Q61245 Gm26077-201ENSMUST00000104064 123 ntBASIC2.66□□□□□ -1.98
Col11a1Q61245 Gm25938-201ENSMUST00000104139 166 ntBASIC2.66□□□□□ -1.98
Col11a1Q61245 Gm23980-201ENSMUST00000157135 158 ntBASIC2.66□□□□□ -1.98
Col11a1Q61245 Gm24010-201ENSMUST00000157731 282 ntBASIC2.66□□□□□ -1.98
Col11a1Q61245 Mir8116-201ENSMUST00000184134 97 ntBASIC2.66□□□□□ -1.98
Col11a1Q61245 Gm29475-201ENSMUST00000190767 312 ntBASIC2.66□□□□□ -1.98
Col11a1Q61245 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col11a1Q61245 Gm18015-201ENSMUST00000214879 316 ntBASIC2.66□□□□□ -1.98
Col11a1Q61245 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col11a1Q61245 Gm42537-201ENSMUST00000198260 2574 ntBASIC2.66□□□□□ -1.98
Col11a1Q61245 Gm10997-201ENSMUST00000210294 1500 ntBASIC2.66□□□□□ -1.98
Col11a1Q61245 Gm37899-201ENSMUST00000193116 8717 ntBASIC2.66□□□□□ -1.98
Col11a1Q61245 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
Col11a1Q61245 Gm20542-201ENSMUST00000174582 372 ntBASIC2.65□□□□□ -1.98
Col11a1Q61245 Gm27443-201ENSMUST00000184660 98 ntBASIC2.65□□□□□ -1.98
Col11a1Q61245 Gm28975-201ENSMUST00000186412 686 ntBASIC2.65□□□□□ -1.98
Col11a1Q61245 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC2.65□□□□□ -1.98
Col11a1Q61245 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.65□□□□□ -1.98
Col11a1Q61245 AC124549.2-201ENSMUST00000224243 222 ntBASIC2.65□□□□□ -1.98
Col11a1Q61245 Gm10212-201ENSMUST00000087884 324 ntBASIC2.65□□□□□ -1.98
Col11a1Q61245 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Col11a1Q61245 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
Col11a1Q61245 Gm37470-201ENSMUST00000193378 2798 ntBASIC2.65□□□□□ -1.98
Col11a1Q61245 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Col11a1Q61245 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col11a1Q61245 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col11a1Q61245 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col11a1Q61245 Gm8338-201ENSMUST00000163928 363 ntBASIC2.65□□□□□ -1.99
Col11a1Q61245 Gm28627-201ENSMUST00000186141 453 ntBASIC2.65□□□□□ -1.99
Col11a1Q61245 Gm44408-201ENSMUST00000200205 66 ntBASIC2.65□□□□□ -1.99
Col11a1Q61245 Gm44903-201ENSMUST00000206840 130 ntBASIC2.65□□□□□ -1.99
Col11a1Q61245 Olfr790-204ENSMUST00000218901 1070 ntBASIC2.65□□□□□ -1.99
Col11a1Q61245 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.65□□□□□ -1.99
Col11a1Q61245 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col11a1Q61245 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col11a1Q61245 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col11a1Q61245 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col11a1Q61245 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC2.64□□□□□ -1.99
Col11a1Q61245 Gm21742-201ENSMUST00000189352 548 ntBASIC2.64□□□□□ -1.99
Col11a1Q61245 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col11a1Q61245 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.64□□□□□ -1.99
Col11a1Q61245 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.64□□□□□ -1.99
Col11a1Q61245 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.64□□□□□ -1.99
Col11a1Q61245 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col11a1Q61245 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col11a1Q61245 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col11a1Q61245 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col11a1Q61245 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col11a1Q61245 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col11a1Q61245 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.64□□□□□ -1.99
Col11a1Q61245 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col11a1Q61245 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm12607-201ENSMUST00000120724 493 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm24436-201ENSMUST00000157889 302 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm23043-201ENSMUST00000157890 109 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm5263-201ENSMUST00000163646 601 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm22108-201ENSMUST00000177961 106 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm24798-201ENSMUST00000179334 106 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm19269-201ENSMUST00000211401 804 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Col11a1Q61245 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm15244-201ENSMUST00000121122 130 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm5396-201ENSMUST00000121222 532 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm43655-201ENSMUST00000197367 222 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm43295-201ENSMUST00000201439 412 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm45654-201ENSMUST00000210980 123 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.63□□□□□ -1.99
Col11a1Q61245 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.62□□□□□ -1.99
Col11a1Q61245 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col11a1Q61245 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Col11a1Q61245 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Col11a1Q61245 Gm14794-201ENSMUST00000118181 192 ntBASIC2.62□□□□□ -1.99
Col11a1Q61245 Gm25807-201ENSMUST00000122783 305 ntBASIC2.62□□□□□ -1.99
Col11a1Q61245 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Col11a1Q61245 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.62□□□□□ -1.99
Col11a1Q61245 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.62□□□□□ -1.99
Col11a1Q61245 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Col11a1Q61245 Gm25628-201ENSMUST00000084002 105 ntBASIC2.62□□□□□ -1.99
Col11a1Q61245 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.62□□□□□ -1.99
Col11a1Q61245 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.62□□□□□ -1.99
Col11a1Q61245 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.62□□□□□ -1.99
Col11a1Q61245 Gm14823-201ENSMUST00000117698 238 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms