Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.38□□□□□ -2.03
Trav5d-4Q5R1F6 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm23911-201ENSMUST00000104596 134 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm14880-201ENSMUST00000117581 292 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm15382-201ENSMUST00000118011 537 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm16383-201ENSMUST00000118122 232 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm14897-201ENSMUST00000118213 207 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm12137-201ENSMUST00000119565 346 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm15272-201ENSMUST00000120865 233 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm7308-201ENSMUST00000121087 447 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm23886-201ENSMUST00000122684 313 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm23380-201ENSMUST00000158448 103 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm3470-201ENSMUST00000160819 420 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm22853-201ENSMUST00000174974 131 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Snord53-201ENSMUST00000175146 78 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm29576-201ENSMUST00000188020 678 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm28354-201ENSMUST00000190904 678 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm37281-201ENSMUST00000192412 439 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm37616-201ENSMUST00000193974 322 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 AC151730.2-201ENSMUST00000224027 475 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trav5d-4Q5R1F6 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm24376-201ENSMUST00000104399 127 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm25728-201ENSMUST00000104525 159 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm11367-201ENSMUST00000117802 120 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm6591-201ENSMUST00000121063 434 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm22839-201ENSMUST00000158436 304 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm23409-201ENSMUST00000158516 237 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm24736-201ENSMUST00000158862 130 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm25470-201ENSMUST00000175576 111 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm18727-201ENSMUST00000185981 553 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm28060-201ENSMUST00000191554 189 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm43521-201ENSMUST00000197838 255 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm24350-202ENSMUST00000198309 132 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm43107-201ENSMUST00000198729 255 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm46194-201ENSMUST00000218136 320 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.36□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm25097-201ENSMUST00000104042 145 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm25500-201ENSMUST00000104426 123 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm16171-201ENSMUST00000118004 324 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm14627-201ENSMUST00000118931 567 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm13676-201ENSMUST00000122185 591 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm11819-201ENSMUST00000122192 372 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm22651-201ENSMUST00000157872 94 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm25902-201ENSMUST00000158493 318 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm23312-201ENSMUST00000158774 102 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms