Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm25058-201ENSMUST00000157365 128 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm3123-201ENSMUST00000163480 480 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm24080-201ENSMUST00000175178 232 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm25470-201ENSMUST00000175576 111 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm27698-201ENSMUST00000184060 249 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm37001-201ENSMUST00000193377 190 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm45530-201ENSMUST00000211658 225 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm19540-201ENSMUST00000221843 810 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm19786-201ENSMUST00000222589 580 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm18026-201ENSMUST00000222789 727 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm22575-201ENSMUST00000082981 110 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm23104-201ENSMUST00000083722 104 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gm26165-201ENSMUST00000083791 138 ntBASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav3-3Q5R1C3 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Trav3-3Q5R1C3 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.4□□□□□ -2.02
Trav3-3Q5R1C3 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.02
Trav3-3Q5R1C3 Gm23273-201ENSMUST00000104058 135 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm22493-201ENSMUST00000104494 132 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm15268-201ENSMUST00000118845 352 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm9308-201ENSMUST00000119073 448 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Snrpert-201ENSMUST00000121967 279 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm12317-201ENSMUST00000122307 319 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm16274-201ENSMUST00000139251 592 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm25981-201ENSMUST00000157921 295 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm24960-201ENSMUST00000157923 90 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm22531-201ENSMUST00000158819 140 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm17186-201ENSMUST00000171742 456 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm18551-201ENSMUST00000195594 642 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm43228-201ENSMUST00000200735 264 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm45192-201ENSMUST00000206749 283 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm45327-201ENSMUST00000211612 565 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm25856-201ENSMUST00000082786 75 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm10704-201ENSMUST00000098952 730 ntBASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav3-3Q5R1C3 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Mir690-201ENSMUST00000102110 109 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm22658-201ENSMUST00000104196 155 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm9157-201ENSMUST00000117673 225 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm13076-201ENSMUST00000118041 204 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm16005-201ENSMUST00000120515 269 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm15142-201ENSMUST00000121013 856 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm24720-201ENSMUST00000157518 166 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm23098-201ENSMUST00000157552 299 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm23666-201ENSMUST00000158053 116 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm26406-201ENSMUST00000158503 124 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm23473-201ENSMUST00000158883 116 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm16111-201ENSMUST00000162128 285 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm27903-201ENSMUST00000175482 126 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms