Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm9577-201ENSMUST00000174655 2620 ntBASIC8.81□□□□□ -1
Trim41Q5NCC3 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim41Q5NCC3 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm15773-201ENSMUST00000118665 1448 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm11790-201ENSMUST00000119569 455 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm17153-201ENSMUST00000171314 490 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm5777-201ENSMUST00000177265 448 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm29597-201ENSMUST00000188035 308 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm20257-202ENSMUST00000188643 130 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm28957-201ENSMUST00000190174 373 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm37624-201ENSMUST00000193751 219 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Trim41Q5NCC3 AC133079.1-201ENSMUST00000220943 1881 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm43443-201ENSMUST00000202337 2393 ntBASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim41Q5NCC3 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim41Q5NCC3 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trim41Q5NCC3 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trim41Q5NCC3 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC8.79□□□□□ -1
Trim41Q5NCC3 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trim41Q5NCC3 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm37879-201ENSMUST00000193112 1995 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC8.79□□□□□ -1
Trim41Q5NCC3 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim41Q5NCC3 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm13755-201ENSMUST00000118509 305 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm12417-201ENSMUST00000119153 403 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm14876-201ENSMUST00000120795 327 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm13153-201ENSMUST00000120969 637 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm22598-201ENSMUST00000157600 127 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm7837-201ENSMUST00000190873 412 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm8599-201ENSMUST00000193033 457 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm17954-201ENSMUST00000195893 607 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 AC153954.2-201ENSMUST00000213811 287 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm26330-201ENSMUST00000082817 104 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC8.79□□□□□ -1
Trim41Q5NCC3 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trim41Q5NCC3 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim41Q5NCC3 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Trim41Q5NCC3 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trim41Q5NCC3 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trim41Q5NCC3 Gm43197-201ENSMUST00000201493 2583 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm3978-201ENSMUST00000163406 2512 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm23422-201ENSMUST00000102000 107 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm24121-201ENSMUST00000102029 106 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm25938-201ENSMUST00000104139 166 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm23481-201ENSMUST00000104173 131 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm22097-201ENSMUST00000157929 278 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm25048-201ENSMUST00000158598 91 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Mir713-201ENSMUST00000178651 108 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm27414-201ENSMUST00000185033 381 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC8.78□□□□□ -1
Trim41Q5NCC3 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 AC159709.1-201ENSMUST00000220445 349 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 CT030242.3-201ENSMUST00000221231 581 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 AC161269.1-201ENSMUST00000228426 318 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm4987-201ENSMUST00000078326 408 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 n-R5s166-201ENSMUST00000082898 121 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm19666-201ENSMUST00000198176 1893 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 AW046200-203ENSMUST00000211787 2479 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Gm381-201ENSMUST00000117443 2037 ntBASIC8.78□□□□□ -1
Trim41Q5NCC3 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trim41Q5NCC3 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim41Q5NCC3 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trim41Q5NCC3 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Gm25875-201ENSMUST00000104323 107 ntBASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Gm13329-201ENSMUST00000117063 265 ntBASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Gm5937-201ENSMUST00000119715 643 ntBASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Gm23463-201ENSMUST00000122468 99 ntBASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 AC125223.1-203ENSMUST00000225304 498 ntBASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Gm24045-201ENSMUST00000083113 98 ntBASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim41Q5NCC3 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim41Q5NCC3 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms