Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.07□□□□□ -1.92
Upf3bQ3ULL6 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm14537-201ENSMUST00000117464 599 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm11693-201ENSMUST00000119625 565 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm14877-201ENSMUST00000119803 478 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm12412-201ENSMUST00000121867 328 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm24592-201ENSMUST00000122505 106 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm22521-201ENSMUST00000158272 134 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm23312-201ENSMUST00000158774 102 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm24875-201ENSMUST00000158888 104 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm24350-202ENSMUST00000198309 132 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm43894-201ENSMUST00000203274 688 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm19177-201ENSMUST00000204520 613 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm45273-201ENSMUST00000211559 281 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm18015-201ENSMUST00000214879 316 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Gm9628-201ENSMUST00000222169 725 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Upf3bQ3ULL6 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm25466-201ENSMUST00000103995 132 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm23911-201ENSMUST00000104596 134 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm14518-201ENSMUST00000117351 542 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm14627-201ENSMUST00000118931 567 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm13359-201ENSMUST00000119000 695 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm12819-201ENSMUST00000122223 629 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm26277-201ENSMUST00000157097 152 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Mir6405-201ENSMUST00000184584 124 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm28113-201ENSMUST00000188280 229 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm37817-201ENSMUST00000195276 434 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm18340-201ENSMUST00000196342 609 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm18748-201ENSMUST00000198507 622 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm43239-201ENSMUST00000200131 201 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm42474-201ENSMUST00000201073 505 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm44688-201ENSMUST00000209083 537 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm45400-201ENSMUST00000211603 653 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm18557-201ENSMUST00000218710 433 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm18704-201ENSMUST00000219736 446 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Snora23-201ENSMUST00000082517 184 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Gm25202-201ENSMUST00000082838 191 ntBASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Upf3bQ3ULL6 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Gm11898-201ENSMUST00000117161 385 ntBASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Gm13443-201ENSMUST00000120770 555 ntBASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Gm6591-201ENSMUST00000121063 434 ntBASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Gm12313-201ENSMUST00000121347 421 ntBASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Gm17204-201ENSMUST00000167936 478 ntBASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Gm5268-201ENSMUST00000189212 940 ntBASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Upf3bQ3ULL6 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms