Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm12492-201ENSMUST00000117665 564 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm11356-201ENSMUST00000118974 192 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm14939-201ENSMUST00000120347 680 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm14591-201ENSMUST00000120407 518 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm13443-201ENSMUST00000120770 555 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm7209-201ENSMUST00000122339 333 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm9785-202ENSMUST00000144563 593 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm9696-202ENSMUST00000191541 830 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm33973-201ENSMUST00000195148 534 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm43765-201ENSMUST00000196303 893 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim43aQ3TL54 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Mir294-201ENSMUST00000104710 84 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm14162-201ENSMUST00000121985 601 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm22187-201ENSMUST00000157819 129 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm5967-201ENSMUST00000172723 494 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm20651-201ENSMUST00000177219 329 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Mir7062-201ENSMUST00000185038 66 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm29553-201ENSMUST00000189692 279 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm37288-201ENSMUST00000193963 334 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm37523-201ENSMUST00000194901 412 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm45078-201ENSMUST00000205343 546 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Gm44688-201ENSMUST00000209083 537 ntBASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim43aQ3TL54 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm22072-201ENSMUST00000116850 121 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm14142-201ENSMUST00000117833 296 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm11598-201ENSMUST00000119257 357 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm7308-201ENSMUST00000121087 447 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm26027-201ENSMUST00000122725 268 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm26099-201ENSMUST00000157248 109 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm24787-201ENSMUST00000157380 123 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm27330-201ENSMUST00000184689 132 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm29534-201ENSMUST00000187328 382 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm19641-201ENSMUST00000188432 417 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm29365-201ENSMUST00000189461 699 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm22970-201ENSMUST00000083304 186 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Trim43aQ3TL54 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm25728-201ENSMUST00000104525 159 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm11456-201ENSMUST00000121070 256 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm25883-201ENSMUST00000157781 271 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm25898-201ENSMUST00000158303 106 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm27527-201ENSMUST00000183903 99 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm44232-201ENSMUST00000204537 225 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm6112-201ENSMUST00000208037 629 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm45742-201ENSMUST00000212400 433 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm45860-201ENSMUST00000212700 334 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trim43aQ3TL54 Gm23615-201ENSMUST00000082602 65 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms