Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm8580-201ENSMUST00000160295 464 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Gm26400-201ENSMUST00000175012 85 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Gm29665-201ENSMUST00000191457 528 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Gm37338-201ENSMUST00000191986 127 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Msx2Q03358 Gm38183-201ENSMUST00000193189 205 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.59□□□□□ -1.67
Msx2Q03358 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.59□□□□□ -1.67
Msx2Q03358 Gm33952-201ENSMUST00000197795 408 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Igkv15-102-201ENSMUST00000197885 287 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Gm7721-201ENSMUST00000200446 546 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Msx2Q03358 Gm44811-201ENSMUST00000209120 228 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.59□□□□□ -1.67
Msx2Q03358 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.59□□□□□ -1.67
Msx2Q03358 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.59□□□□□ -1.67
Msx2Q03358 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Msx2Q03358 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Msx2Q03358 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Msx2Q03358 Gm5215-201ENSMUST00000054380 405 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Gm26329-201ENSMUST00000093723 110 ntBASIC4.59□□□□□ -1.67
Msx2Q03358 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Msx2Q03358 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Msx2Q03358 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
Msx2Q03358 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
Msx2Q03358 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.59□□□□□ -1.68
Msx2Q03358 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Msx2Q03358 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Msx2Q03358 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Msx2Q03358 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Msx2Q03358 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Msx2Q03358 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Msx2Q03358 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Msx2Q03358 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Msx2Q03358 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.58□□□□□ -1.68
Msx2Q03358 Gm14541-201ENSMUST00000118985 157 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm13932-201ENSMUST00000120873 610 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm12893-201ENSMUST00000121732 275 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm13007-201ENSMUST00000121866 365 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Msx2Q03358 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.58□□□□□ -1.68
Msx2Q03358 Gm26278-201ENSMUST00000157098 132 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm24060-201ENSMUST00000157494 95 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Msx2Q03358 Mir3097-201ENSMUST00000175356 67 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Mup-ps11-201ENSMUST00000178040 545 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Mup-ps3-201ENSMUST00000178315 545 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm26622-201ENSMUST00000180520 298 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm27849-201ENSMUST00000183673 125 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm2497-201ENSMUST00000189539 601 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.58□□□□□ -1.68
Msx2Q03358 Gm37128-201ENSMUST00000192599 232 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm10292-202ENSMUST00000193165 585 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Msx2Q03358 Gm44157-201ENSMUST00000204720 410 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.58□□□□□ -1.68
Msx2Q03358 Gm44879-201ENSMUST00000207007 503 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm45200-201ENSMUST00000207434 919 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.58□□□□□ -1.68
Msx2Q03358 Gm3086-202ENSMUST00000221248 310 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm7117-201ENSMUST00000071515 387 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm23055-201ENSMUST00000082805 94 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm23677-201ENSMUST00000083156 104 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm26163-201ENSMUST00000083792 178 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Gm9386-201ENSMUST00000095195 381 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Msx2Q03358 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 Neat1-201ENSMUST00000173672 20771 ntBASIC4.58□□□□□ -1.68
Msx2Q03358 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.57□□□□□ -1.68
Msx2Q03358 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Msx2Q03358 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Msx2Q03358 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.57□□□□□ -1.68
Msx2Q03358 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.57□□□□□ -1.68
Msx2Q03358 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Msx2Q03358 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Msx2Q03358 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Msx2Q03358 Gm13232-201ENSMUST00000121816 632 ntBASIC4.57□□□□□ -1.68
Msx2Q03358 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.57□□□□□ -1.68
Msx2Q03358 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.57□□□□□ -1.68
Msx2Q03358 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Msx2Q03358 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Msx2Q03358 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.57□□□□□ -1.68
Msx2Q03358 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.57□□□□□ -1.68
Msx2Q03358 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Msx2Q03358 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Msx2Q03358 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Msx2Q03358 Gm27254-201ENSMUST00000183926 517 ntBASIC4.57□□□□□ -1.68
Msx2Q03358 Gm27521-201ENSMUST00000184022 64 ntBASIC4.57□□□□□ -1.68
Msx2Q03358 Gm38053-201ENSMUST00000193938 160 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms