Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Nkx3-1P97436 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm43478-201ENSMUST00000200381 292 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm44232-201ENSMUST00000204537 225 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm44157-201ENSMUST00000204720 410 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC2.43□□□□□ -2.02
Nkx3-1P97436 AC132104.1-201ENSMUST00000213615 260 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm18557-201ENSMUST00000218710 433 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm2436-201ENSMUST00000219562 774 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm7422-201ENSMUST00000220115 640 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm4945-201ENSMUST00000075152 453 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm24144-201ENSMUST00000082632 111 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Snord7-201ENSMUST00000083781 97 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.43□□□□□ -2.02
Nkx3-1P97436 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
Nkx3-1P97436 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Nkx3-1P97436 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm22782-201ENSMUST00000104082 132 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm11577-201ENSMUST00000118030 737 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm5384-201ENSMUST00000120313 463 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm14939-201ENSMUST00000120347 680 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm23213-201ENSMUST00000122715 313 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm7846-201ENSMUST00000145844 274 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm24780-201ENSMUST00000157635 143 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm26000-201ENSMUST00000157991 107 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm25898-201ENSMUST00000158303 106 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm25971-201ENSMUST00000158953 286 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm22500-201ENSMUST00000158982 99 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm27025-201ENSMUST00000182392 942 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm27527-201ENSMUST00000183903 99 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm27700-201ENSMUST00000185003 81 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm38076-201ENSMUST00000193889 450 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm37616-201ENSMUST00000193974 322 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm43393-201ENSMUST00000200147 194 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm19177-201ENSMUST00000204520 613 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm46234-201ENSMUST00000218702 259 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm9628-201ENSMUST00000222169 725 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 AC140393.2-201ENSMUST00000226894 943 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Olfr203-201ENSMUST00000089305 924 ntBASIC2.42□□□□□ -2.02
Nkx3-1P97436 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Nkx3-1P97436 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.41□□□□□ -2.02
Nkx3-1P97436 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm12213-201ENSMUST00000119924 353 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm15019-201ENSMUST00000120148 434 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm11446-201ENSMUST00000121319 866 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm14840-201ENSMUST00000122135 594 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 DQ267100-201ENSMUST00000122600 72 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm22961-201ENSMUST00000157964 106 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm15508-201ENSMUST00000160330 325 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Samd15-201ENSMUST00000169669 1194 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm23963-201ENSMUST00000179603 77 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Mir7242-201ENSMUST00000183710 79 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.41□□□□□ -2.02
Nkx3-1P97436 Trbv7-201ENSMUST00000193339 402 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm37353-201ENSMUST00000194497 313 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Nkx3-1P97436 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm43368-201ENSMUST00000200638 409 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm44076-201ENSMUST00000203072 520 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 AC161520.1-201ENSMUST00000210954 939 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Nkx3-1P97436 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Nkx3-1P97436 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.41□□□□□ -2.02
Nkx3-1P97436 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.41□□□□□ -2.02
Nkx3-1P97436 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms