Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NcanP55066 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.69□□□□□ -1.82
NcanP55066 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
NcanP55066 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NcanP55066 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
NcanP55066 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NcanP55066 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
NcanP55066 Gm22782-201ENSMUST00000104082 132 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm4596-201ENSMUST00000117197 442 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm5123-201ENSMUST00000121905 837 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm5755-201ENSMUST00000152394 837 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm24787-201ENSMUST00000157380 123 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm23753-201ENSMUST00000157575 149 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm16584-201ENSMUST00000159267 189 ntBASIC3.68□□□□□ -1.82
NcanP55066 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.68□□□□□ -1.82
NcanP55066 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.68□□□□□ -1.82
NcanP55066 Zfp950-206ENSMUST00000178819 171 ntBASIC3.68□□□□□ -1.82
NcanP55066 Mir6393-201ENSMUST00000183709 94 ntBASIC3.68□□□□□ -1.82
NcanP55066 Mir8118-201ENSMUST00000183962 129 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm19498-201ENSMUST00000191128 331 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm38075-201ENSMUST00000191979 920 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.68□□□□□ -1.82
NcanP55066 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.68□□□□□ -1.82
NcanP55066 Gm37575-201ENSMUST00000195467 309 ntBASIC3.68□□□□□ -1.82
NcanP55066 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm42958-201ENSMUST00000197595 318 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm44490-201ENSMUST00000198566 127 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.68□□□□□ -1.82
NcanP55066 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.68□□□□□ -1.82
NcanP55066 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.68□□□□□ -1.82
NcanP55066 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.68□□□□□ -1.82
NcanP55066 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NcanP55066 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.68□□□□□ -1.82
NcanP55066 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NcanP55066 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NcanP55066 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NcanP55066 Mir28a-201ENSMUST00000083560 86 ntBASIC3.68□□□□□ -1.82
NcanP55066 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.68□□□□□ -1.82
NcanP55066 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.68□□□□□ -1.82
NcanP55066 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NcanP55066 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.68□□□□□ -1.82
NcanP55066 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NcanP55066 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NcanP55066 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NcanP55066 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NcanP55066 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NcanP55066 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NcanP55066 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NcanP55066 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NcanP55066 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NcanP55066 Gm23063-201ENSMUST00000102350 93 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm24119-201ENSMUST00000103979 246 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm23951-201ENSMUST00000104029 132 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm13640-201ENSMUST00000118445 264 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm15190-201ENSMUST00000120855 276 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm13865-201ENSMUST00000120957 865 ntBASIC3.67□□□□□ -1.82
NcanP55066 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.67□□□□□ -1.82
NcanP55066 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NcanP55066 Gm24898-201ENSMUST00000158133 106 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm2855-201ENSMUST00000166765 456 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm17655-201ENSMUST00000167969 255 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm20526-201ENSMUST00000173416 158 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm18667-201ENSMUST00000186523 484 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.67□□□□□ -1.82
NcanP55066 Gm2719-201ENSMUST00000191929 444 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm42857-201ENSMUST00000200823 339 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.67□□□□□ -1.82
NcanP55066 Gm19253-201ENSMUST00000204279 307 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm44634-201ENSMUST00000206119 152 ntBASIC3.67□□□□□ -1.82
NcanP55066 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NcanP55066 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.67□□□□□ -1.82
NcanP55066 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.67□□□□□ -1.82
NcanP55066 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.67□□□□□ -1.82
NcanP55066 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NcanP55066 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NcanP55066 Gm25582-201ENSMUST00000083412 110 ntBASIC3.67□□□□□ -1.82
NcanP55066 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NcanP55066 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NcanP55066 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NcanP55066 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.67□□□□□ -1.82
NcanP55066 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NcanP55066 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm13504-201ENSMUST00000117490 316 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm13603-201ENSMUST00000119404 83 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm12383-201ENSMUST00000120628 760 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm15157-201ENSMUST00000121852 702 ntBASIC3.66□□□□□ -1.82
NcanP55066 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms