Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm11252-201ENSMUST00000120572 939 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm23754-201ENSMUST00000157576 63 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Mir3965-201ENSMUST00000175570 69 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm20656-201ENSMUST00000176925 518 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm7870-201ENSMUST00000184467 616 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sox3P53784 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm29299-201ENSMUST00000185609 923 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm28141-201ENSMUST00000186676 342 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm28594-201ENSMUST00000187022 661 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm29573-201ENSMUST00000190291 919 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm38149-201ENSMUST00000191943 339 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.14□□□□□ -1.91
Sox3P53784 Gm43228-201ENSMUST00000200735 264 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm6064-201ENSMUST00000203999 454 ntBASIC3.14□□□□□ -1.91
Sox3P53784 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.14□□□□□ -1.91
Sox3P53784 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Sox3P53784 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Gm30534-201ENSMUST00000217928 207 ntBASIC3.14□□□□□ -1.91
Sox3P53784 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.14□□□□□ -1.91
Sox3P53784 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Sox3P53784 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Sox3P53784 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sox3P53784 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sox3P53784 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.14□□□□□ -1.91
Sox3P53784 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Sox3P53784 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sox3P53784 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Sox3P53784 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.13□□□□□ -1.91
Sox3P53784 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sox3P53784 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.13□□□□□ -1.91
Sox3P53784 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Sox3P53784 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.13□□□□□ -1.91
Sox3P53784 Gm14125-201ENSMUST00000113442 680 ntBASIC3.13□□□□□ -1.91
Sox3P53784 Gm25317-201ENSMUST00000116824 129 ntBASIC3.13□□□□□ -1.91
Sox3P53784 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sox3P53784 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sox3P53784 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sox3P53784 Gm18727-201ENSMUST00000185981 553 ntBASIC3.13□□□□□ -1.91
Sox3P53784 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.13□□□□□ -1.91
Sox3P53784 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.13□□□□□ -1.91
Sox3P53784 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.13□□□□□ -1.91
Sox3P53784 Gm45400-201ENSMUST00000211603 653 ntBASIC3.13□□□□□ -1.91
Sox3P53784 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.13□□□□□ -1.91
Sox3P53784 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.13□□□□□ -1.91
Sox3P53784 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.13□□□□□ -1.91
Sox3P53784 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.13□□□□□ -1.91
Sox3P53784 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.13□□□□□ -1.91
Sox3P53784 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.13□□□□□ -1.91
Sox3P53784 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.13□□□□□ -1.91
Sox3P53784 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sox3P53784 Gm22293-201ENSMUST00000083314 109 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms