Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm44852-201ENSMUST00000207950 369 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 AC101984.1-201ENSMUST00000219639 402 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Gm8274-201ENSMUST00000219820 463 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Gm3086-202ENSMUST00000221248 310 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Rfx1P48377 Snora52-201ENSMUST00000082732 137 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Gm24611-201ENSMUST00000083272 107 ntBASIC5.56□□□□□ -1.52
Rfx1P48377 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC5.56□□□□□ -1.52
Rfx1P48377 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Rfx1P48377 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Rfx1P48377 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rfx1P48377 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
Rfx1P48377 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx1P48377 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC5.55□□□□□ -1.52
Rfx1P48377 Gm13664-201ENSMUST00000117304 345 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm14657-201ENSMUST00000117461 302 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm12062-201ENSMUST00000117533 259 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm15807-201ENSMUST00000119880 1128 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm13537-201ENSMUST00000120467 267 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm14287-201ENSMUST00000121060 117 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm22718-201ENSMUST00000122701 315 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.55□□□□□ -1.52
Rfx1P48377 Gm24636-201ENSMUST00000158673 288 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm10319-202ENSMUST00000159439 846 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rfx1P48377 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rfx1P48377 Mir7222-201ENSMUST00000183740 75 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm18956-201ENSMUST00000192857 480 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm43408-201ENSMUST00000198263 440 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm43039-201ENSMUST00000202883 963 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm44208-201ENSMUST00000205199 421 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm7407-201ENSMUST00000208301 568 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 CT009718.4-201ENSMUST00000221881 109 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rfx1P48377 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx1P48377 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx1P48377 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx1P48377 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx1P48377 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Rfx1P48377 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.55□□□□□ -1.52
Rfx1P48377 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rfx1P48377 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Rfx1P48377 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx1P48377 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx1P48377 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Rfx1P48377 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Rfx1P48377 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx1P48377 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Rfx1P48377 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Rfx1P48377 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Gm25943-201ENSMUST00000103791 90 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Mir466b-7-201ENSMUST00000103804 88 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Mir466b-5-201ENSMUST00000103900 88 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 n-R5s202-201ENSMUST00000104517 114 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Gm13488-201ENSMUST00000120419 179 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Gm23213-201ENSMUST00000122715 313 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Gm23496-201ENSMUST00000157741 248 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx1P48377 Mir466b-4-201ENSMUST00000178801 90 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Gm25285-201ENSMUST00000178951 90 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Mir466b-6-201ENSMUST00000180061 90 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Mir466c-2-201ENSMUST00000180211 90 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.54□□□□□ -1.52
Rfx1P48377 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.54□□□□□ -1.52
Rfx1P48377 Gm6059-201ENSMUST00000196903 340 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Mir6994-201ENSMUST00000198985 73 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Mir691-201ENSMUST00000199719 78 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC5.54□□□□□ -1.52
Rfx1P48377 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 AC135019.1-201ENSMUST00000219949 307 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx1P48377 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx1P48377 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx1P48377 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx1P48377 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Rfx1P48377 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Rfx1P48377 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Rfx1P48377 Gm38265-201ENSMUST00000193479 3766 ntBASIC5.54□□□□□ -1.52
Rfx1P48377 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rfx1P48377 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Rfx1P48377 Gm37879-201ENSMUST00000193112 1995 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Rfx1P48377 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx1P48377 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx1P48377 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm15603-201ENSMUST00000119252 492 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm5391-201ENSMUST00000121155 613 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm11804-201ENSMUST00000121663 468 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm5123-201ENSMUST00000121905 837 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm25325-201ENSMUST00000122559 86 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm5755-201ENSMUST00000152394 837 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm8580-201ENSMUST00000160295 464 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms