Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm12880-201ENSMUST00000120652 494 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Gm14506-201ENSMUST00000121165 536 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Gm22666-201ENSMUST00000158717 164 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Gm25971-201ENSMUST00000158953 286 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Gm25642-201ENSMUST00000175137 66 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Gm19791-201ENSMUST00000180398 859 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Cdx2P43241 Mir6393-201ENSMUST00000183709 94 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Gm27527-201ENSMUST00000183903 99 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Gm28975-201ENSMUST00000186412 686 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Cdx2P43241 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Cdx2P43241 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC2.61□□□□□ -1.99
Cdx2P43241 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.61□□□□□ -1.99
Cdx2P43241 Gm37533-201ENSMUST00000193848 545 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Gm37616-201ENSMUST00000193974 322 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.61□□□□□ -1.99
Cdx2P43241 Gm5175-202ENSMUST00000219699 529 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Cdx2P43241 Gm10088-201ENSMUST00000074116 423 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Cdx2P43241 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Cdx2P43241 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Cdx2P43241 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Cdx2P43241 Gm18491-201ENSMUST00000192492 1594 ntBASIC2.61□□□□□ -1.99
Cdx2P43241 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Cdx2P43241 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Cdx2P43241 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Cdx2P43241 Gm23577-201ENSMUST00000103950 110 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Gm13349-201ENSMUST00000118436 411 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Gm22961-201ENSMUST00000157964 106 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Gm22858-201ENSMUST00000174972 76 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Gm1833-201ENSMUST00000191608 682 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Gm37431-201ENSMUST00000195102 111 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.6□□□□□ -1.99
Cdx2P43241 Gm43124-201ENSMUST00000201878 278 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Gm44208-201ENSMUST00000205199 421 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Gm17872-201ENSMUST00000222550 532 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 AC154562.1-201ENSMUST00000226140 966 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cdx2P43241 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Cdx2P43241 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Cdx2P43241 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Cdx2P43241 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Cdx2P43241 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.6□□□□□ -1.99
Cdx2P43241 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Cdx2P43241 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Cdx2P43241 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Cdx2P43241 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Cdx2P43241 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Cdx2P43241 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Cdx2P43241 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Cdx2P43241 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Gm11221-201ENSMUST00000117230 597 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Gm14163-201ENSMUST00000117342 217 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Gm11414-201ENSMUST00000121795 263 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Gm22107-201ENSMUST00000122548 100 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Gm25476-201ENSMUST00000175125 185 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Cdx2P43241 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Cdx2P43241 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.59□□□□□ -1.99
Cdx2P43241 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.59□□□□□ -1.99
Cdx2P43241 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC2.59□□□□□ -1.99
Cdx2P43241 Gm18423-201ENSMUST00000205144 1074 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Gm44519-201ENSMUST00000206486 122 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Gm45013-201ENSMUST00000206883 178 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdx2P43241 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdx2P43241 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.59□□□□□ -1.99
Cdx2P43241 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Cdx2P43241 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.59□□□□□ -2
Cdx2P43241 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Cdx2P43241 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.59□□□□□ -2
Cdx2P43241 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Cdx2P43241 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
Cdx2P43241 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Cdx2P43241 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.58□□□□□ -2
Cdx2P43241 Gm37879-201ENSMUST00000193112 1995 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm11577-201ENSMUST00000118030 737 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm14877-201ENSMUST00000119803 478 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm16331-201ENSMUST00000144274 498 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm25863-201ENSMUST00000158249 329 ntBASIC2.58□□□□□ -2
Cdx2P43241 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdx2P43241 Gm27786-201ENSMUST00000184337 70 ntBASIC2.58□□□□□ -2
Cdx2P43241 Mir8090-201ENSMUST00000185078 136 ntBASIC2.58□□□□□ -2
Cdx2P43241 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cdx2P43241 Gm29525-201ENSMUST00000189844 699 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm19418-201ENSMUST00000197436 580 ntBASIC2.58□□□□□ -2
Cdx2P43241 Mir378a-201ENSMUST00000198300 66 ntBASIC2.58□□□□□ -2
Cdx2P43241 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms