Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.41□□□□□ -2.02
HttP42859 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
HttP42859 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HttP42859 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HttP42859 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HttP42859 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.41□□□□□ -2.02
HttP42859 Gm43104-201ENSMUST00000197234 311 ntBASIC2.41□□□□□ -2.02
HttP42859 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.41□□□□□ -2.02
HttP42859 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.41□□□□□ -2.02
HttP42859 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HttP42859 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.41□□□□□ -2.02
HttP42859 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HttP42859 Gm15846-201ENSMUST00000116022 320 ntBASIC2.41□□□□□ -2.02
HttP42859 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HttP42859 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HttP42859 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
HttP42859 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC2.4□□□□□ -2.02
HttP42859 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.4□□□□□ -2.02
HttP42859 Gm19177-201ENSMUST00000204520 613 ntBASIC2.4□□□□□ -2.02
HttP42859 Gm19252-201ENSMUST00000204705 305 ntBASIC2.4□□□□□ -2.02
HttP42859 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
HttP42859 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC2.4□□□□□ -2.02
HttP42859 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HttP42859 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC2.4□□□□□ -2.03
HttP42859 Gm26345-201ENSMUST00000157534 120 ntBASIC2.4□□□□□ -2.03
HttP42859 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.4□□□□□ -2.03
HttP42859 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
HttP42859 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.39□□□□□ -2.03
HttP42859 Gm9785-202ENSMUST00000144563 593 ntBASIC2.39□□□□□ -2.03
HttP42859 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
HttP42859 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.39□□□□□ -2.03
HttP42859 Gm20304-201ENSMUST00000218168 444 ntBASIC2.39□□□□□ -2.03
HttP42859 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.39□□□□□ -2.03
HttP42859 Rny1-201ENSMUST00000083767 112 ntBASIC2.39□□□□□ -2.03
HttP42859 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
HttP42859 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
HttP42859 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
HttP42859 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HttP42859 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HttP42859 Gm14794-201ENSMUST00000118181 192 ntBASIC2.39□□□□□ -2.03
HttP42859 Gm14957-201ENSMUST00000121069 817 ntBASIC2.39□□□□□ -2.03
HttP42859 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.39□□□□□ -2.03
HttP42859 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.39□□□□□ -2.03
HttP42859 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.39□□□□□ -2.03
HttP42859 Gm22330-201ENSMUST00000158068 115 ntBASIC2.39□□□□□ -2.03
HttP42859 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HttP42859 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HttP42859 Gm24076-201ENSMUST00000158179 94 ntBASIC2.39□□□□□ -2.03
HttP42859 Gm23409-201ENSMUST00000158516 237 ntBASIC2.39□□□□□ -2.03
HttP42859 Gm6374-201ENSMUST00000159051 788 ntBASIC2.39□□□□□ -2.03
HttP42859 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.39□□□□□ -2.03
HttP42859 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.39□□□□□ -2.03
HttP42859 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.39□□□□□ -2.03
HttP42859 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HttP42859 Gm22683-201ENSMUST00000082854 137 ntBASIC2.39□□□□□ -2.03
HttP42859 Gm38081-201ENSMUST00000192680 1645 ntBASIC2.38□□□□□ -2.03
HttP42859 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HttP42859 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.38□□□□□ -2.03
HttP42859 CT030254.3-201ENSMUST00000225959 1231 ntBASIC2.38□□□□□ -2.03
HttP42859 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HttP42859 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
HttP42859 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.38□□□□□ -2.03
HttP42859 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HttP42859 Gm28404-201ENSMUST00000190242 453 ntBASIC2.37□□□□□ -2.03
HttP42859 Gm45078-201ENSMUST00000205343 546 ntBASIC2.37□□□□□ -2.03
HttP42859 Gm44533-201ENSMUST00000207782 268 ntBASIC2.37□□□□□ -2.03
HttP42859 AC139294.1-201ENSMUST00000226708 571 ntBASIC2.37□□□□□ -2.03
HttP42859 Gm25170-201ENSMUST00000104191 129 ntBASIC2.37□□□□□ -2.03
HttP42859 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.37□□□□□ -2.03
HttP42859 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC2.37□□□□□ -2.03
HttP42859 Gm18727-201ENSMUST00000185981 553 ntBASIC2.37□□□□□ -2.03
HttP42859 Gm6195-201ENSMUST00000063059 357 ntBASIC2.37□□□□□ -2.03
HttP42859 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HttP42859 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.37□□□□□ -2.03
HttP42859 Gm27668-201ENSMUST00000184188 120 ntBASIC2.37□□□□□ -2.03
HttP42859 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HttP42859 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC2.37□□□□□ -2.03
HttP42859 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.36□□□□□ -2.03
HttP42859 Gm7582-201ENSMUST00000160831 603 ntBASIC2.36□□□□□ -2.03
HttP42859 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HttP42859 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HttP42859 Gm44938-201ENSMUST00000208614 427 ntBASIC2.36□□□□□ -2.03
HttP42859 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.36□□□□□ -2.03
HttP42859 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HttP42859 Gm25628-201ENSMUST00000084002 105 ntBASIC2.36□□□□□ -2.03
HttP42859 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
HttP42859 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HttP42859 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HttP42859 Mir294-201ENSMUST00000104710 84 ntBASIC2.36□□□□□ -2.03
HttP42859 Gm27271-201ENSMUST00000183509 170 ntBASIC2.36□□□□□ -2.03
HttP42859 Gm38212-201ENSMUST00000194081 2756 ntBASIC2.36□□□□□ -2.03
HttP42859 Gm7039-201ENSMUST00000205138 346 ntBASIC2.36□□□□□ -2.03
HttP42859 AC160134.1-201ENSMUST00000213450 551 ntBASIC2.36□□□□□ -2.03
HttP42859 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.36□□□□□ -2.03
HttP42859 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
HttP42859 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HttP42859 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.35□□□□□ -2.03
HttP42859 Gm43655-201ENSMUST00000197367 222 ntBASIC2.35□□□□□ -2.03
HttP42859 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
HttP42859 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms