Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Usp4P35123 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Usp4P35123 Gm11395-201ENSMUST00000181011 499 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Gm11394-201ENSMUST00000181421 517 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Usp4P35123 Gm4842-201ENSMUST00000183237 835 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Mir6393-201ENSMUST00000183709 94 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Mir6391-201ENSMUST00000184391 104 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.67□□□□□ -1.66
Usp4P35123 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Usp4P35123 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
Usp4P35123 Gm38044-201ENSMUST00000192964 487 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Gm38167-201ENSMUST00000195704 1178 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Gm43825-201ENSMUST00000199650 734 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp4P35123 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.67□□□□□ -1.66
Usp4P35123 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Gm6043-201ENSMUST00000099961 492 ntBASIC4.67□□□□□ -1.66
Usp4P35123 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Usp4P35123 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.67□□□□□ -1.66
Usp4P35123 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp4P35123 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp4P35123 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp4P35123 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
Usp4P35123 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp4P35123 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
Usp4P35123 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp4P35123 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp4P35123 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp4P35123 Gm22488-201ENSMUST00000116811 127 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm15058-201ENSMUST00000117689 458 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm12739-201ENSMUST00000119769 382 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm14500-201ENSMUST00000121647 113 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC4.66□□□□□ -1.66
Usp4P35123 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.66□□□□□ -1.66
Usp4P35123 Gm24499-201ENSMUST00000158446 104 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm17153-201ENSMUST00000171314 490 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Mir7022-201ENSMUST00000183749 61 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm21856-201ENSMUST00000187547 696 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm32447-201ENSMUST00000194265 697 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm37817-201ENSMUST00000195276 434 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm42830-201ENSMUST00000196642 313 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.66□□□□□ -1.66
Usp4P35123 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.66□□□□□ -1.66
Usp4P35123 Gm44794-201ENSMUST00000206550 411 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp4P35123 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp4P35123 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp4P35123 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp4P35123 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp4P35123 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp4P35123 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp4P35123 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Usp4P35123 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Usp4P35123 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp4P35123 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.66□□□□□ -1.66
Usp4P35123 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Usp4P35123 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.65□□□□□ -1.66
Usp4P35123 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.65□□□□□ -1.66
Usp4P35123 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Usp4P35123 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
Usp4P35123 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.65□□□□□ -1.66
Usp4P35123 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Usp4P35123 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Usp4P35123 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Usp4P35123 Gm24124-201ENSMUST00000104103 132 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm12765-201ENSMUST00000117273 615 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm13085-201ENSMUST00000118356 171 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm15553-201ENSMUST00000118757 430 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm15603-201ENSMUST00000119252 492 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm13239-201ENSMUST00000119920 637 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm12884-201ENSMUST00000120371 325 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm13745-201ENSMUST00000121994 527 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
Usp4P35123 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.65□□□□□ -1.67
Usp4P35123 Gm23167-201ENSMUST00000157155 103 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm22216-201ENSMUST00000157557 114 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm25913-201ENSMUST00000157617 135 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm15900-201ENSMUST00000161584 342 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.65□□□□□ -1.67
Usp4P35123 Gm20428-201ENSMUST00000174365 283 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Mir3104-201ENSMUST00000174911 63 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm19898-201ENSMUST00000177490 251 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm22633-201ENSMUST00000179834 107 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm26866-201ENSMUST00000180414 802 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm26828-201ENSMUST00000180640 172 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.65□□□□□ -1.67
Usp4P35123 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.65□□□□□ -1.67
Usp4P35123 Gm27233-201ENSMUST00000184030 307 ntBASIC4.65□□□□□ -1.67
Usp4P35123 Gm27564-201ENSMUST00000185196 96 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms