Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Col2a1P28481 Gm26341-201ENSMUST00000104561 134 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Col2a1P28481 Gm11797-201ENSMUST00000121336 754 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Gm12313-201ENSMUST00000121347 421 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Col2a1P28481 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.03□□□□□ -1.93
Col2a1P28481 Gm22651-201ENSMUST00000157872 94 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Gm25863-201ENSMUST00000158249 329 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Col2a1P28481 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.93
Col2a1P28481 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC3.03□□□□□ -1.93
Col2a1P28481 Gm29556-201ENSMUST00000187591 696 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Gm19498-201ENSMUST00000191128 331 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Gm38041-201ENSMUST00000194445 661 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Gm43090-201ENSMUST00000202459 314 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Gm44431-201ENSMUST00000203500 413 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.03□□□□□ -1.93
Col2a1P28481 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.93
Col2a1P28481 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Col2a1P28481 Gm22622-201ENSMUST00000082870 129 ntBASIC3.03□□□□□ -1.93
Col2a1P28481 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Col2a1P28481 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Col2a1P28481 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col2a1P28481 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Col2a1P28481 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col2a1P28481 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.02□□□□□ -1.93
Col2a1P28481 Gm24671-201ENSMUST00000104159 158 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC3.02□□□□□ -1.93
Col2a1P28481 Mir1192-201ENSMUST00000116976 121 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Gm6565-201ENSMUST00000121217 438 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Gm11965-201ENSMUST00000122017 277 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Col2a1P28481 Gm26187-201ENSMUST00000157693 101 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC3.02□□□□□ -1.93
Col2a1P28481 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.02□□□□□ -1.93
Col2a1P28481 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Col2a1P28481 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Col2a1P28481 Gm27427-201ENSMUST00000185134 193 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Col2a1P28481 Gm28926-201ENSMUST00000191063 680 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Gm44665-201ENSMUST00000205381 251 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Gm18855-201ENSMUST00000206689 570 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Gm44830-201ENSMUST00000207667 584 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.02□□□□□ -1.93
Col2a1P28481 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Gm23407-201ENSMUST00000082538 91 ntBASIC3.02□□□□□ -1.93
Col2a1P28481 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col2a1P28481 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.02□□□□□ -1.93
Col2a1P28481 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col2a1P28481 Gm15785-201ENSMUST00000119145 694 ntBASIC3.01□□□□□ -1.93
Col2a1P28481 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col2a1P28481 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.01□□□□□ -1.93
Col2a1P28481 Gm20450-201ENSMUST00000173652 147 ntBASIC3.01□□□□□ -1.93
Col2a1P28481 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC3.01□□□□□ -1.93
Col2a1P28481 Gm37934-201ENSMUST00000192902 402 ntBASIC3.01□□□□□ -1.93
Col2a1P28481 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.01□□□□□ -1.93
Col2a1P28481 Gm34091-201ENSMUST00000200875 604 ntBASIC3.01□□□□□ -1.93
Col2a1P28481 Gm44088-201ENSMUST00000204595 237 ntBASIC3.01□□□□□ -1.93
Col2a1P28481 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.01□□□□□ -1.93
Col2a1P28481 Gm45013-201ENSMUST00000206883 178 ntBASIC3.01□□□□□ -1.93
Col2a1P28481 Gm45710-201ENSMUST00000212847 215 ntBASIC3.01□□□□□ -1.93
Col2a1P28481 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.01□□□□□ -1.93
Col2a1P28481 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.01□□□□□ -1.93
Col2a1P28481 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col2a1P28481 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col2a1P28481 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Col2a1P28481 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3□□□□□ -1.93
Col2a1P28481 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col2a1P28481 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Col2a1P28481 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3□□□□□ -1.93
Col2a1P28481 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col2a1P28481 Gm25529-201ENSMUST00000104850 92 ntBASIC3□□□□□ -1.93
Col2a1P28481 Gm12598-201ENSMUST00000117333 830 ntBASIC3□□□□□ -1.93
Col2a1P28481 Gm14890-201ENSMUST00000117660 676 ntBASIC3□□□□□ -1.93
Col2a1P28481 Gm13359-201ENSMUST00000119000 695 ntBASIC3□□□□□ -1.93
Col2a1P28481 Gm19200-201ENSMUST00000182579 1001 ntBASIC3□□□□□ -1.93
Col2a1P28481 Gm28466-201ENSMUST00000190678 659 ntBASIC3□□□□□ -1.93
Col2a1P28481 Gm37989-201ENSMUST00000195202 803 ntBASIC3□□□□□ -1.93
Col2a1P28481 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3□□□□□ -1.93
Col2a1P28481 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3□□□□□ -1.93
Col2a1P28481 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3□□□□□ -1.93
Col2a1P28481 Gm31532-201ENSMUST00000203555 767 ntBASIC3□□□□□ -1.93
Col2a1P28481 Gm45474-201ENSMUST00000209471 408 ntBASIC3□□□□□ -1.93
Col2a1P28481 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3□□□□□ -1.93
Col2a1P28481 CT009733.1-203ENSMUST00000224033 451 ntBASIC3□□□□□ -1.93
Col2a1P28481 AC156574.2-201ENSMUST00000228023 282 ntBASIC3□□□□□ -1.93
Col2a1P28481 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3□□□□□ -1.93
Col2a1P28481 Mir129-2-201ENSMUST00000083577 90 ntBASIC3□□□□□ -1.93
Col2a1P28481 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3□□□□□ -1.93
Col2a1P28481 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms