Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm12213-201ENSMUST00000119924 353 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm12640-201ENSMUST00000120097 310 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm14238-201ENSMUST00000120227 323 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Sdc1P18828 Gm5963-201ENSMUST00000143451 236 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC2.61□□□□□ -1.99
Sdc1P18828 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.61□□□□□ -1.99
Sdc1P18828 Gm22637-201ENSMUST00000158144 283 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Sdc1P18828 Gm8649-201ENSMUST00000181799 233 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm26960-201ENSMUST00000182263 412 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.61□□□□□ -1.99
Sdc1P18828 Gm27599-201ENSMUST00000183758 174 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Mir6345-201ENSMUST00000184286 128 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Mir8096-201ENSMUST00000184526 127 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm18667-201ENSMUST00000186523 484 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm28650-201ENSMUST00000188413 411 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm28069-201ENSMUST00000189926 214 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.61□□□□□ -1.99
Sdc1P18828 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm9655-201ENSMUST00000211321 1284 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm39147-201ENSMUST00000211376 465 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm31849-201ENSMUST00000220306 375 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 AC158525.1-201ENSMUST00000223806 576 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 AC091783.5-201ENSMUST00000224928 671 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 AC132112.1-201ENSMUST00000226354 505 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 AC158955.1-201ENSMUST00000227140 385 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Gm10038-201ENSMUST00000077233 441 ntBASIC2.61□□□□□ -1.99
Sdc1P18828 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Sdc1P18828 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Sdc1P18828 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Sdc1P18828 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm7853-201ENSMUST00000100708 478 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Sdc1P18828 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm9009-201ENSMUST00000117321 326 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm14469-201ENSMUST00000118363 202 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm14975-201ENSMUST00000118741 664 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm11414-201ENSMUST00000121795 263 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm24720-201ENSMUST00000157518 166 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm25666-201ENSMUST00000157702 107 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm22532-201ENSMUST00000158822 140 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm27342-201ENSMUST00000183530 109 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm27527-201ENSMUST00000183903 99 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm6651-201ENSMUST00000189471 271 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm37708-201ENSMUST00000192337 895 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm37732-201ENSMUST00000194377 316 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm43370-201ENSMUST00000196437 284 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm44208-201ENSMUST00000205199 421 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm17838-201ENSMUST00000205872 876 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm45105-201ENSMUST00000207824 397 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Gm18462-201ENSMUST00000208112 417 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC2.6□□□□□ -1.99
Sdc1P18828 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm10088-201ENSMUST00000074116 423 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Sdc1P18828 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.6□□□□□ -1.99
Sdc1P18828 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Sdc1P18828 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Sdc1P18828 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Sdc1P18828 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Sdc1P18828 Gm24469-201ENSMUST00000104487 131 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm16171-201ENSMUST00000118004 324 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm13454-201ENSMUST00000118166 483 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm14669-201ENSMUST00000118841 250 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm12994-201ENSMUST00000119601 447 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm11704-201ENSMUST00000120031 214 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Amd-ps1-201ENSMUST00000120127 994 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm11582-201ENSMUST00000121041 236 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.59□□□□□ -1.99
Sdc1P18828 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Sdc1P18828 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.59□□□□□ -1.99
Sdc1P18828 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Sdc1P18828 Gm16250-201ENSMUST00000148974 256 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.59□□□□□ -1.99
Sdc1P18828 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.59□□□□□ -1.99
Sdc1P18828 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.59□□□□□ -1.99
Sdc1P18828 Mir1947-201ENSMUST00000158235 85 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm22839-201ENSMUST00000158436 304 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm7582-201ENSMUST00000160831 603 ntBASIC2.59□□□□□ -1.99
Sdc1P18828 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms