Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Cdx1P18111 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cdx1P18111 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Cdx1P18111 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Cdx1P18111 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Cdx1P18111 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Cdx1P18111 Gm24119-201ENSMUST00000103979 246 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm13076-201ENSMUST00000118041 204 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm14731-201ENSMUST00000119216 376 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC2.74□□□□□ -1.97
Cdx1P18111 Gm14810-201ENSMUST00000121628 486 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm1989-201ENSMUST00000126244 636 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.74□□□□□ -1.97
Cdx1P18111 Gm24059-201ENSMUST00000157493 312 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm23391-201ENSMUST00000157579 104 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm24550-201ENSMUST00000158648 279 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm25977-201ENSMUST00000158697 85 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Cdx1P18111 Gm3123-201ENSMUST00000163480 480 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdx1P18111 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdx1P18111 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Cdx1P18111 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdx1P18111 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm8649-201ENSMUST00000181799 233 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC2.74□□□□□ -1.97
Cdx1P18111 Gm7634-201ENSMUST00000185778 553 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
Cdx1P18111 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC2.74□□□□□ -1.97
Cdx1P18111 Gm18956-201ENSMUST00000192857 480 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm37001-201ENSMUST00000193377 190 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm17966-201ENSMUST00000193453 594 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm43142-201ENSMUST00000198670 361 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC2.74□□□□□ -1.97
Cdx1P18111 Gm18645-201ENSMUST00000209593 651 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.74□□□□□ -1.97
Cdx1P18111 Gm19219-201ENSMUST00000215863 724 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.74□□□□□ -1.97
Cdx1P18111 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Cdx1P18111 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.74□□□□□ -1.97
Cdx1P18111 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.74□□□□□ -1.97
Cdx1P18111 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Cdx1P18111 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdx1P18111 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdx1P18111 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Cdx1P18111 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Cdx1P18111 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
Cdx1P18111 Gm23175-201ENSMUST00000104371 132 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm13082-201ENSMUST00000118877 561 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm14804-201ENSMUST00000122322 508 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm14129-201ENSMUST00000122436 291 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.73□□□□□ -1.97
Cdx1P18111 Gm23168-201ENSMUST00000157156 143 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm22380-201ENSMUST00000157479 95 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm24532-201ENSMUST00000157951 286 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm23666-201ENSMUST00000158053 116 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC2.73□□□□□ -1.97
Cdx1P18111 Gm37288-201ENSMUST00000193963 334 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm37617-201ENSMUST00000194309 159 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC2.73□□□□□ -1.97
Cdx1P18111 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm43991-201ENSMUST00000203751 274 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm17838-201ENSMUST00000205872 876 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC2.73□□□□□ -1.97
Cdx1P18111 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.73□□□□□ -1.97
Cdx1P18111 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC2.73□□□□□ -1.97
Cdx1P18111 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gnrh1-202ENSMUST00000223929 428 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 AC124581.4-201ENSMUST00000225874 463 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Cdx1P18111 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Cdx1P18111 Gm22739-201ENSMUST00000083437 160 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Cdx1P18111 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Cdx1P18111 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
Cdx1P18111 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.73□□□□□ -1.97
Cdx1P18111 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Cdx1P18111 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Cdx1P18111 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Cdx1P18111 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Cdx1P18111 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Cdx1P18111 Gm22497-201ENSMUST00000104499 131 ntBASIC2.72□□□□□ -1.97
Cdx1P18111 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Cdx1P18111 Gm13731-201ENSMUST00000117332 196 ntBASIC2.72□□□□□ -1.97
Cdx1P18111 Gm14739-201ENSMUST00000120424 802 ntBASIC2.72□□□□□ -1.97
Cdx1P18111 Gm14069-201ENSMUST00000120815 229 ntBASIC2.72□□□□□ -1.97
Cdx1P18111 Gm8840-201ENSMUST00000122454 386 ntBASIC2.72□□□□□ -1.97
Cdx1P18111 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.72□□□□□ -1.97
Cdx1P18111 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.72□□□□□ -1.97
Cdx1P18111 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Cdx1P18111 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms