Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Mir32-201ENSMUST00000083610 70 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
Msx1P13297 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Msx1P13297 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Msx1P13297 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.28□□□□□ -1.56
Msx1P13297 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Msx1P13297 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.28□□□□□ -1.56
Msx1P13297 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Msx1P13297 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.28□□□□□ -1.56
Msx1P13297 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Msx1P13297 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Msx1P13297 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Msx1P13297 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.27□□□□□ -1.57
Msx1P13297 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Msx1P13297 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.27□□□□□ -1.57
Msx1P13297 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.27□□□□□ -1.57
Msx1P13297 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.27□□□□□ -1.57
Msx1P13297 Gm17976-201ENSMUST00000184037 1909 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
Msx1P13297 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Msx1P13297 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 Gm6134-201ENSMUST00000117265 171 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Gm26026-201ENSMUST00000122726 123 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.27□□□□□ -1.57
Msx1P13297 Gm16060-201ENSMUST00000153140 478 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Gm26291-201ENSMUST00000158889 137 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 Gm16490-201ENSMUST00000165299 351 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Mir7056-201ENSMUST00000183776 59 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.27□□□□□ -1.57
Msx1P13297 Gm29022-201ENSMUST00000190702 225 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC5.27□□□□□ -1.57
Msx1P13297 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Msx1P13297 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.27□□□□□ -1.57
Msx1P13297 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Gm22061-201ENSMUST00000082557 107 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Mir31-201ENSMUST00000083474 106 ntBASIC5.27□□□□□ -1.57
Msx1P13297 Gm23795-201ENSMUST00000084006 137 ntBASIC5.27□□□□□ -1.57
Msx1P13297 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 BC051076-202ENSMUST00000199477 2868 ntBASIC5.27□□□□□ -1.57
Msx1P13297 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Msx1P13297 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Msx1P13297 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.27□□□□□ -1.57
Msx1P13297 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Msx1P13297 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.26□□□□□ -1.57
Msx1P13297 CT025577.1-201ENSMUST00000220862 2846 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Msx1P13297 Gm26500-201ENSMUST00000101867 106 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm22272-201ENSMUST00000104039 134 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm11561-201ENSMUST00000117429 417 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm11270-201ENSMUST00000117685 471 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm12850-201ENSMUST00000119210 436 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm14875-201ENSMUST00000120881 319 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm7308-201ENSMUST00000121087 447 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm12413-201ENSMUST00000121508 312 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm12732-201ENSMUST00000121688 180 ntBASIC5.26□□□□□ -1.57
Msx1P13297 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm6265-201ENSMUST00000149263 231 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm25054-201ENSMUST00000157370 97 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm18520-201ENSMUST00000174783 658 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm25615-201ENSMUST00000177836 94 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.26□□□□□ -1.57
Msx1P13297 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.26□□□□□ -1.57
Msx1P13297 Gm37601-201ENSMUST00000194922 394 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm37167-201ENSMUST00000194946 396 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC5.26□□□□□ -1.57
Msx1P13297 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Gm8288-201ENSMUST00000223406 593 ntBASIC5.26□□□□□ -1.57
Msx1P13297 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.26□□□□□ -1.57
Msx1P13297 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.26□□□□□ -1.57
Msx1P13297 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.26□□□□□ -1.57
Msx1P13297 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Gm7808-201ENSMUST00000082002 387 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.26□□□□□ -1.57
Msx1P13297 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Msx1P13297 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Msx1P13297 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms