Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC2.77□□□□□ -1.97
Col1a1P11087 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.77□□□□□ -1.97
Col1a1P11087 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.77□□□□□ -1.97
Col1a1P11087 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.77□□□□□ -1.97
Col1a1P11087 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.77□□□□□ -1.97
Col1a1P11087 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col1a1P11087 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col1a1P11087 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Col1a1P11087 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col1a1P11087 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 Gm25113-201ENSMUST00000157185 143 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 Gm22192-201ENSMUST00000175128 85 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 Gm21991-201ENSMUST00000180006 508 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Col1a1P11087 Gm37579-201ENSMUST00000194291 142 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 Gm2142-201ENSMUST00000197899 589 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col1a1P11087 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col1a1P11087 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col1a1P11087 Snord21-201ENSMUST00000082519 94 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 Gm22806-201ENSMUST00000082738 136 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 AF357341-201ENSMUST00000083088 75 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 Gm25632-201ENSMUST00000083112 85 ntBASIC2.76□□□□□ -1.97
Col1a1P11087 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col1a1P11087 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col1a1P11087 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col1a1P11087 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.75□□□□□ -1.97
Col1a1P11087 Gm45395-201ENSMUST00000209891 559 ntBASIC2.75□□□□□ -1.97
Col1a1P11087 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC2.75□□□□□ -1.97
Col1a1P11087 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col1a1P11087 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col1a1P11087 Olfr203-201ENSMUST00000089305 924 ntBASIC2.75□□□□□ -1.97
Col1a1P11087 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col1a1P11087 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Col1a1P11087 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col1a1P11087 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col1a1P11087 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Col1a1P11087 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Col1a1P11087 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col1a1P11087 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col1a1P11087 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col1a1P11087 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 Gm16355-201ENSMUST00000128606 231 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 Gm23600-201ENSMUST00000157260 71 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 Gm24436-201ENSMUST00000157889 302 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 Gm24601-201ENSMUST00000157970 143 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col1a1P11087 Gm24561-201ENSMUST00000175182 95 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC2.74□□□□□ -1.97
Col1a1P11087 Gm9251-201ENSMUST00000197202 628 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 Gm43083-201ENSMUST00000199594 476 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col1a1P11087 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 Gm23623-201ENSMUST00000082461 107 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 Gm15773-201ENSMUST00000118665 1448 ntBASIC2.74□□□□□ -1.97
Col1a1P11087 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col1a1P11087 Gm23942-201ENSMUST00000101956 107 ntBASIC2.73□□□□□ -1.97
Col1a1P11087 Mir758-201ENSMUST00000103260 81 ntBASIC2.73□□□□□ -1.97
Col1a1P11087 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col1a1P11087 Snora36b-201ENSMUST00000104383 132 ntBASIC2.73□□□□□ -1.97
Col1a1P11087 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.73□□□□□ -1.97
Col1a1P11087 Gm12607-201ENSMUST00000120724 493 ntBASIC2.73□□□□□ -1.97
Col1a1P11087 Gm15244-201ENSMUST00000121122 130 ntBASIC2.73□□□□□ -1.97
Col1a1P11087 Gm17711-201ENSMUST00000172028 237 ntBASIC2.73□□□□□ -1.97
Col1a1P11087 Gm44060-201ENSMUST00000204440 410 ntBASIC2.73□□□□□ -1.97
Col1a1P11087 Gm19252-201ENSMUST00000204705 305 ntBASIC2.73□□□□□ -1.97
Col1a1P11087 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col1a1P11087 Gm25628-201ENSMUST00000084002 105 ntBASIC2.73□□□□□ -1.97
Col1a1P11087 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col1a1P11087 Gm8744-201ENSMUST00000204475 3581 ntBASIC2.73□□□□□ -1.97
Col1a1P11087 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col1a1P11087 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col1a1P11087 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC2.72□□□□□ -1.97
Col1a1P11087 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col1a1P11087 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col1a1P11087 Gm12042-201ENSMUST00000120479 301 ntBASIC2.72□□□□□ -1.97
Col1a1P11087 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Col1a1P11087 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.72□□□□□ -1.97
Col1a1P11087 Trav20-201ENSMUST00000142754 347 ntBASIC2.72□□□□□ -1.97
Col1a1P11087 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.72□□□□□ -1.97
Col1a1P11087 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC2.72□□□□□ -1.97
Col1a1P11087 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col1a1P11087 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.72□□□□□ -1.97
Col1a1P11087 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.72□□□□□ -1.97
Col1a1P11087 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.72□□□□□ -1.97
Col1a1P11087 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.72□□□□□ -1.97
Col1a1P11087 AC105169.1-201ENSMUST00000218912 1294 ntBASIC2.72□□□□□ -1.97
Col1a1P11087 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.72□□□□□ -1.97
Col1a1P11087 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.72□□□□□ -1.97
Col1a1P11087 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.72□□□□□ -1.97
Col1a1P11087 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col1a1P11087 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.72□□□□□ -1.97
Col1a1P11087 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Col1a1P11087 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Col1a1P11087 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms