Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm14521-201ENSMUST00000119545 350 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm7308-201ENSMUST00000121087 447 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm15263-201ENSMUST00000121556 642 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm14810-201ENSMUST00000121628 486 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm12732-201ENSMUST00000121688 180 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm23250-201ENSMUST00000157444 267 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm22084-201ENSMUST00000157585 105 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Mir1945-201ENSMUST00000157919 78 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm24216-201ENSMUST00000158259 117 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm25175-201ENSMUST00000178712 79 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm23922-201ENSMUST00000178792 79 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm24657-201ENSMUST00000180085 79 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm22996-201ENSMUST00000180236 79 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm37681-201ENSMUST00000193880 727 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm33952-201ENSMUST00000197795 408 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC4.37□□□□□ -1.71
Hoxd3P09027 AC122332.1-201ENSMUST00000214384 285 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm23330-201ENSMUST00000082660 164 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm26457-201ENSMUST00000082678 78 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm23239-201ENSMUST00000083006 181 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm38036-201ENSMUST00000194586 3564 ntBASIC4.37□□□□□ -1.71
Hoxd3P09027 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Hoxd3P09027 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Hoxd3P09027 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Hoxd3P09027 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Hoxd3P09027 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 AC162908.1-201ENSMUST00000219164 4563 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Hoxd3P09027 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm11429-201ENSMUST00000119089 144 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Defa-ps11-201ENSMUST00000119719 299 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm11481-201ENSMUST00000120069 255 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.36□□□□□ -1.71
Hoxd3P09027 Mir1970-201ENSMUST00000157839 104 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm26028-201ENSMUST00000158660 294 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm26337-201ENSMUST00000178000 79 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm28385-201ENSMUST00000185671 292 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm20203-201ENSMUST00000192352 332 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm34224-201ENSMUST00000204606 364 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm44520-201ENSMUST00000205447 802 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm44648-201ENSMUST00000208267 329 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 AC122320.1-201ENSMUST00000227233 105 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 AC159896.3-201ENSMUST00000215904 3835 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm37773-201ENSMUST00000194141 2120 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.36□□□□□ -1.71
Hoxd3P09027 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Hoxd3P09027 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.36□□□□□ -1.71
Hoxd3P09027 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd3P09027 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd3P09027 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd3P09027 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.35□□□□□ -1.71
Hoxd3P09027 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Hoxd3P09027 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms