Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4□□□□□ -1.77
Smarce1O54941 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Smarce1O54941 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Smarce1O54941 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4□□□□□ -1.77
Smarce1O54941 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC4□□□□□ -1.77
Smarce1O54941 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Smarce1O54941 Gm42909-201ENSMUST00000196982 3619 ntBASIC4□□□□□ -1.77
Smarce1O54941 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Smarce1O54941 Gm24096-201ENSMUST00000103905 110 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm23948-201ENSMUST00000104030 132 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC3.99□□□□□ -1.77
Smarce1O54941 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC3.99□□□□□ -1.77
Smarce1O54941 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC3.99□□□□□ -1.77
Smarce1O54941 Gm15108-201ENSMUST00000116160 803 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm12935-201ENSMUST00000119352 246 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm22107-201ENSMUST00000122548 100 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm22986-201ENSMUST00000122753 130 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.99□□□□□ -1.77
Smarce1O54941 Gm23084-201ENSMUST00000157850 114 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm25334-201ENSMUST00000158036 110 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm23312-201ENSMUST00000158774 102 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm24819-201ENSMUST00000175094 166 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm25874-201ENSMUST00000178030 79 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Mir6986-201ENSMUST00000184483 58 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm17929-201ENSMUST00000186851 627 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm28785-201ENSMUST00000187478 379 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm28113-201ENSMUST00000188280 229 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Smarce1O54941 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.99□□□□□ -1.77
Smarce1O54941 Gm37603-201ENSMUST00000192368 219 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.99□□□□□ -1.77
Smarce1O54941 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.99□□□□□ -1.77
Smarce1O54941 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.99□□□□□ -1.77
Smarce1O54941 Gm44583-201ENSMUST00000207478 281 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Smarce1O54941 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.99□□□□□ -1.77
Smarce1O54941 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Smarce1O54941 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Smarce1O54941 Snord35b-201ENSMUST00000082833 87 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Gm24921-201ENSMUST00000083024 107 ntBASIC3.99□□□□□ -1.77
Smarce1O54941 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Smarce1O54941 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Smarce1O54941 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Smarce1O54941 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Smarce1O54941 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
Smarce1O54941 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Smarce1O54941 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Mir193b-201ENSMUST00000103784 79 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Smarce1O54941 Gm12335-201ENSMUST00000119738 327 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.98□□□□□ -1.77
Smarce1O54941 Gm23602-201ENSMUST00000157258 132 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Gm23234-201ENSMUST00000157304 134 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.98□□□□□ -1.77
Smarce1O54941 Gm24520-201ENSMUST00000179510 110 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Gm26988-201ENSMUST00000183296 945 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Gm37979-201ENSMUST00000193065 712 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Smarce1O54941 Gm5983-201ENSMUST00000197739 770 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Gm19243-201ENSMUST00000198592 269 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Gm44355-201ENSMUST00000200417 104 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Gm44611-201ENSMUST00000207507 355 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Gm45539-201ENSMUST00000210313 428 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Smarce1O54941 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.98□□□□□ -1.77
Smarce1O54941 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Smarce1O54941 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Smarce1O54941 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Smarce1O54941 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Smarce1O54941 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Smarce1O54941 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.98□□□□□ -1.77
Smarce1O54941 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Smarce1O54941 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Smarce1O54941 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Smarce1O54941 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Smarce1O54941 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.98□□□□□ -1.77
Smarce1O54941 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Smarce1O54941 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.97□□□□□ -1.77
Smarce1O54941 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Smarce1O54941 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.97□□□□□ -1.77
Smarce1O54941 Mir690-201ENSMUST00000102110 109 ntBASIC3.97□□□□□ -1.77
Smarce1O54941 Mir599-201ENSMUST00000102378 88 ntBASIC3.97□□□□□ -1.77
Smarce1O54941 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Smarce1O54941 Gm14880-201ENSMUST00000117581 292 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms