Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 AC125539.1-202ENSMUST00000226449 670 ntBASIC2.59□□□□□ -1.99
Tnfsf11O35235 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.59□□□□□ -1.99
Tnfsf11O35235 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Tnfsf11O35235 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Tnfsf11O35235 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Tnfsf11O35235 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Tnfsf11O35235 Gm10237-201ENSMUST00000078393 273 ntBASIC2.59□□□□□ -1.99
Tnfsf11O35235 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Tnfsf11O35235 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Tnfsf11O35235 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Tnfsf11O35235 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Tnfsf11O35235 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm22493-201ENSMUST00000104494 132 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.58□□□□□ -2
Tnfsf11O35235 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm12722-201ENSMUST00000118507 493 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm14566-201ENSMUST00000118915 321 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm14901-201ENSMUST00000119001 283 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm11704-201ENSMUST00000120031 214 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm14915-201ENSMUST00000120747 204 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm7308-201ENSMUST00000121087 447 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm5963-201ENSMUST00000143451 236 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm25341-201ENSMUST00000157461 268 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm22769-201ENSMUST00000158367 98 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Nron-204ENSMUST00000158971 370 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm10357-201ENSMUST00000159886 264 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm6395-201ENSMUST00000167639 691 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm3370-201ENSMUST00000171785 500 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Tnfsf11O35235 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Mir3620-201ENSMUST00000184710 61 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.58□□□□□ -2
Tnfsf11O35235 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm5551-201ENSMUST00000199720 690 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC2.58□□□□□ -2
Tnfsf11O35235 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm45382-201ENSMUST00000210607 151 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm9712-201ENSMUST00000210842 311 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm45273-201ENSMUST00000211559 281 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm45796-201ENSMUST00000212483 114 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm18252-203ENSMUST00000215855 757 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC2.58□□□□□ -2
Tnfsf11O35235 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm46369-201ENSMUST00000221577 401 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.58□□□□□ -2
Tnfsf11O35235 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Tnfsf11O35235 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC2.58□□□□□ -2
Tnfsf11O35235 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC2.58□□□□□ -2
Tnfsf11O35235 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC2.58□□□□□ -2
Tnfsf11O35235 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Tnfsf11O35235 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.58□□□□□ -2
Tnfsf11O35235 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.58□□□□□ -2
Tnfsf11O35235 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.58□□□□□ -2
Tnfsf11O35235 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Tnfsf11O35235 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf11O35235 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf11O35235 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.57□□□□□ -2
Tnfsf11O35235 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.57□□□□□ -2
Tnfsf11O35235 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.57□□□□□ -2
Tnfsf11O35235 Gm14518-201ENSMUST00000117351 542 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm13454-201ENSMUST00000118166 483 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm14103-201ENSMUST00000119075 366 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm16445-201ENSMUST00000120399 714 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 n-R5s68-201ENSMUST00000122639 82 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm22986-201ENSMUST00000122753 130 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm5958-201ENSMUST00000147698 297 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm25058-201ENSMUST00000157365 128 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm25666-201ENSMUST00000157702 107 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm24968-201ENSMUST00000179817 107 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm28390-201ENSMUST00000185212 700 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.57□□□□□ -2
Tnfsf11O35235 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.57□□□□□ -2
Tnfsf11O35235 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC2.57□□□□□ -2
Tnfsf11O35235 Gm19774-201ENSMUST00000190667 114 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.57□□□□□ -2
Tnfsf11O35235 Gm32447-201ENSMUST00000194265 697 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.57□□□□□ -2
Tnfsf11O35235 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.57□□□□□ -2
Tnfsf11O35235 Gm44720-201ENSMUST00000206076 260 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm18597-201ENSMUST00000209519 694 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm7380-201ENSMUST00000211599 466 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm18729-201ENSMUST00000217230 621 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm8942-201ENSMUST00000217892 400 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm31849-201ENSMUST00000220306 375 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.57□□□□□ -2
Tnfsf11O35235 Gm40598-201ENSMUST00000222953 547 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms