Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm26362-201ENSMUST00000158865 315 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm10292-201ENSMUST00000183142 581 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm5829-201ENSMUST00000191383 351 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm29740-201ENSMUST00000193182 655 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm37791-201ENSMUST00000195081 286 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm43652-201ENSMUST00000196219 675 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm43651-201ENSMUST00000199796 439 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm43224-201ENSMUST00000201567 898 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm44871-201ENSMUST00000207821 497 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm18672-201ENSMUST00000208035 270 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm5175-202ENSMUST00000219699 529 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Olfr713-201ENSMUST00000098139 975 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.27□□□□□ -1.89
Trav13d-3J3QMG8 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm26418-201ENSMUST00000104275 137 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm12370-201ENSMUST00000117809 604 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm13482-201ENSMUST00000119842 254 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm15263-201ENSMUST00000121556 642 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm23887-201ENSMUST00000122683 172 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm22236-201ENSMUST00000157093 106 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm22059-201ENSMUST00000157544 104 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm26187-201ENSMUST00000157693 101 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm22890-201ENSMUST00000158642 144 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm24551-201ENSMUST00000158645 92 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm27834-201ENSMUST00000183427 125 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Mir6933-201ENSMUST00000184982 81 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm28146-201ENSMUST00000185517 701 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm28574-201ENSMUST00000185757 699 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm8600-201ENSMUST00000186320 905 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm28397-201ENSMUST00000187970 699 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm29366-201ENSMUST00000190481 699 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm37727-201ENSMUST00000191637 819 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm18956-201ENSMUST00000192857 480 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm37845-201ENSMUST00000194977 355 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm26449-201ENSMUST00000082452 104 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm22810-201ENSMUST00000082741 158 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm24950-201ENSMUST00000082768 191 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm23971-201ENSMUST00000083317 191 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm23849-201ENSMUST00000083833 191 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm26316-201ENSMUST00000083886 191 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Trav13d-3J3QMG8 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm22758-201ENSMUST00000102275 96 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm23063-201ENSMUST00000102350 93 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm14537-201ENSMUST00000117464 599 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm14292-201ENSMUST00000118761 456 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm26393-201ENSMUST00000157625 129 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm23123-201ENSMUST00000157648 144 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm24393-201ENSMUST00000158135 97 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm24727-201ENSMUST00000158231 144 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm23112-201ENSMUST00000158606 125 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm19898-201ENSMUST00000177490 251 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm24306-201ENSMUST00000180229 79 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 Gm27189-201ENSMUST00000184119 190 ntBASIC3.25□□□□□ -1.89
Trav13d-3J3QMG8 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms