Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm25293-201ENSMUST00000122792 285 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm12226-201ENSMUST00000144172 876 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm16490-201ENSMUST00000165299 351 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm17086-201ENSMUST00000171346 484 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21842-201ENSMUST00000177552 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21626-201ENSMUST00000177791 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21562-201ENSMUST00000177888 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21539-201ENSMUST00000177925 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21599-201ENSMUST00000178249 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21914-201ENSMUST00000178452 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21723-201ENSMUST00000178692 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21916-201ENSMUST00000178771 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21801-201ENSMUST00000178865 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21633-201ENSMUST00000178941 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm22448-201ENSMUST00000179254 107 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21821-201ENSMUST00000179646 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm26189-201ENSMUST00000179879 107 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21588-201ENSMUST00000180074 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21780-201ENSMUST00000180128 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21572-201ENSMUST00000180134 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm21529-201ENSMUST00000180175 498 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm26622-201ENSMUST00000180520 298 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm29370-202ENSMUST00000187476 499 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm29350-201ENSMUST00000189141 541 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm2719-201ENSMUST00000191929 444 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm44720-201ENSMUST00000206076 260 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm44776-201ENSMUST00000207212 381 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm45498-201ENSMUST00000210346 283 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm45616-201ENSMUST00000211711 319 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm10237-201ENSMUST00000078393 273 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm26447-201ENSMUST00000082448 129 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm25418-201ENSMUST00000104214 129 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm13537-201ENSMUST00000120467 267 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm12693-201ENSMUST00000121965 483 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm11507-201ENSMUST00000156462 412 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm3027-201ENSMUST00000167579 451 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm3104-201ENSMUST00000171004 473 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm24618-201ENSMUST00000177718 94 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm23953-201ENSMUST00000178214 94 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm26332-201ENSMUST00000179813 94 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm22263-201ENSMUST00000180060 104 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm22863-201ENSMUST00000180265 94 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm29097-201ENSMUST00000190273 422 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm36934-201ENSMUST00000192007 306 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm37692-201ENSMUST00000192633 232 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm10292-202ENSMUST00000193165 585 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm42665-201ENSMUST00000202100 586 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm44419-201ENSMUST00000203338 229 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm44336-201ENSMUST00000203696 468 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm2522-201ENSMUST00000204280 322 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm17811-201ENSMUST00000206193 387 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Gm9512-201ENSMUST00000223112 497 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
Pcdh1F7BJK1 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms