Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm24273-201ENSMUST00000102332 164 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm25500-201ENSMUST00000104426 123 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Chd3B1AR17 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm27025-201ENSMUST00000182392 942 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm43115-201ENSMUST00000196244 160 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.78□□□□□ -1.96
Chd3B1AR17 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm5176-202ENSMUST00000220267 583 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm11577-201ENSMUST00000118030 737 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm13210-201ENSMUST00000121483 273 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm15065-201ENSMUST00000121699 273 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm14821-201ENSMUST00000121975 435 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm23116-201ENSMUST00000158481 67 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm17091-201ENSMUST00000163248 357 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm25198-201ENSMUST00000178574 110 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm36997-201ENSMUST00000195090 707 ntBASIC2.78□□□□□ -1.96
Chd3B1AR17 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.78□□□□□ -1.96
Chd3B1AR17 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Mir499-201ENSMUST00000102357 79 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm14537-201ENSMUST00000117464 599 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm15074-201ENSMUST00000117603 936 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm12401-201ENSMUST00000118435 228 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm24885-201ENSMUST00000158783 270 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm7582-201ENSMUST00000160831 603 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm37817-201ENSMUST00000195276 434 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm43922-201ENSMUST00000205071 328 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Chd3B1AR17 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Chd3B1AR17 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Chd3B1AR17 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Chd3B1AR17 Snora23-201ENSMUST00000082517 184 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Chd3B1AR17 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Chd3B1AR17 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Chd3B1AR17 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm25377-201ENSMUST00000104334 129 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm26341-201ENSMUST00000104561 134 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm14448-201ENSMUST00000116383 210 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm5384-201ENSMUST00000120313 463 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm14506-201ENSMUST00000121165 536 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm17166-201ENSMUST00000172006 431 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm38334-201ENSMUST00000195060 313 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm45778-201ENSMUST00000211959 153 ntBASIC2.77□□□□□ -1.97
Chd3B1AR17 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.77□□□□□ -1.97
Chd3B1AR17 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.77□□□□□ -1.97
Chd3B1AR17 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Chd3B1AR17 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Chd3B1AR17 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Chd3B1AR17 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.76□□□□□ -1.97
Chd3B1AR17 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Chd3B1AR17 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.76□□□□□ -1.97
Chd3B1AR17 Gm23551-201ENSMUST00000116852 121 ntBASIC2.76□□□□□ -1.97
Chd3B1AR17 Gm14518-201ENSMUST00000117351 542 ntBASIC2.76□□□□□ -1.97
Chd3B1AR17 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.76□□□□□ -1.97
Chd3B1AR17 Gm27044-201ENSMUST00000183033 796 ntBASIC2.76□□□□□ -1.97
Chd3B1AR17 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.76□□□□□ -1.97
Chd3B1AR17 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Chd3B1AR17 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Chd3B1AR17 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Chd3B1AR17 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Chd3B1AR17 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Chd3B1AR17 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm25808-201ENSMUST00000122784 284 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Mir6393-201ENSMUST00000183709 94 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm44076-201ENSMUST00000203072 520 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 AC147615.1-201ENSMUST00000218914 441 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm17872-201ENSMUST00000222550 532 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Chd3B1AR17 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Chd3B1AR17 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm3940-201ENSMUST00000105087 432 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm11483-201ENSMUST00000119839 247 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms